Quantification of functional classes


Blast result Functional classes RNA processing and modification - related function(s) Group code
Eten_0261_orf3 A RNAse L inhibitor, ABC superfamily KOG0063
Eten_4472_orf2 AB mRNA splicing factor/probable chromatin binding snw family nuclear protein KOG2441
Eten_5404_orf1 A ATP-dependent RNA helicase KOG0330
Eten_7278_orf1 A WD40-repeat-containing subunit of the 18S rRNA processing complex KOG1272
Eten_8524_orf1 A Small nuclear ribonucleoprotein (snRNP) KOG3293
Eten_8698_orf1 A DEAD-box protein abstrakt KOG0341
Eten_1313_orf1 A Polyadenylation factor I complex, subunit, Yth1 (CPSF subunit) KOG1040
Eten_2635_orf1 A Splicing factor U2AF, large subunit (RRM superfamily) KOG0120
Eten_2936_orf2 A Spliceosomal protein snRNP-U1A/U2B KOG4206
Eten_3448_orf2 A Small nuclear ribonucleoprotein (snRNP) SMF KOG3482
Eten_3826_orf4 A Transcription elongation factor SPT6 KOG1856
Eten_6080_orf4 A Splicing factor 1/branch point binding protein (RRM superfamily) KOG0119
Eten_6080_orf4 A Splicing factor (branch point binding protein) COG5176
Eten_6873_orf1 A ATP-dependent RNA helicase pitchoune KOG0342
Eten_7015_orf1 A mRNA export protein (contains WD40 repeats) KOG0647
Eten_8437_orf1 A ATP-dependent RNA helicase KOG0329
Eten_0014_orf1 A Exon-exon junction complex, Magoh component KOG3392
Eten_0106_orf2 A ATP-dependent RNA helicase KOG0330
Eten_0107_orf1 A ATP-dependent RNA helicase KOG0330
Eten_0112_orf2 A ATP-dependent RNA helicase KOG0338
Eten_0134_orf4 A Ribosomal RNA adenine dimethylase KOG0820
Eten_0163_orf1 A Pleiotropic regulator 1 KOG0285
Eten_0182_orf3 A Alternative splicing factor SRp20/9G8 (RRM superfamily) KOG0107
Eten_0192_orf5 A Poly(A) polymerase and related nucleotidyltransferases KOG2245
Eten_0192_orf5 A Poly(A) polymerase COG5186
Eten_0262_orf1 A Protein required for normal rRNA processing KOG2481
Eten_0272_orf2 A RNA helicase KOG0347
Eten_0316_orf1 A RNA-binding protein musashi/mRNA cleavage and polyadenylation factor I complex, subunit HRP1 KOG4205
Eten_0401_orf1 A RNA helicase KOG0334
Eten_0424_orf4 A RNA-binding protein CUGBP1/BRUNO (RRM superfamily) KOG0144
Eten_0529_orf1 A HAT repeat protein KOG0495
Eten_0631_orf3 A Polypyrimidine tract-binding protein PUF60 (RRM superfamily) KOG0124
Eten_0631_orf3 A mRNA splicing factor KOG1996
Eten_0699_orf3 A mRNA splicing factor KOG1996
Eten_0701_orf1 AB mRNA splicing factor/probable chromatin binding snw family nuclear protein KOG2441
Eten_0765_orf1 A Predicted N6-adenine RNA methylase KOG2098
Eten_0775_orf3 A U5 snRNP spliceosome subunit KOG1795
Eten_0775_orf3 A U5 snRNP spliceosome subunit COG5178
Eten_0791_orf1 A Splicing factor hnRNP-F and related RNA-binding proteins KOG4211
Eten_0792_orf1 A mRNA splicing factor ATP-dependent RNA helicase KOG0923
Eten_0801_orf1 A RNA helicase KOG0334
Eten_0840_orf1 A RNA helicase nonsense mRNA reducing factor (pNORF1) KOG1802
Eten_0938_orf1 AJ Ribosome biogenesis protein - Nop56p/Sik1p KOG2573
Eten_0942_orf3 A RNA-binding nuclear protein (MAK16) containing a distinct C4 Zn-finger KOG3064
Eten_1074_orf1 A Splicing factor 3b, subunit 3 KOG1898
Eten_1105_orf1 A Spliceosomal protein FBP11/Splicing factor PRP40 KOG0152
Eten_1105_orf1 A Splicing factor COG5104
Eten_1114_orf1 A RNA helicase KOG0346
Eten_1157_orf1 LA 5-3 exonuclease HKE1/RAT1 KOG2044
Eten_1157_orf1 LDA 5-3 exonuclease COG5049
Eten_1378_orf3 AR Splicing coactivator SRm160/300, subunit SRm160 (contains PWI domain) KOG2146
Eten_1389_orf1 AJ Ribosome biogenesis protein - Nop58p/Nop5p KOG2572
Eten_1393_orf2 A U5 snRNP-like RNA helicase subunit KOG0333
Eten_1443_orf2 A ATP-dependent RNA helicase KOG0339
Eten_1450_orf5 A Alternative splicing factor ASF/SF2 (RRM superfamily) KOG0105
Eten_1491_orf2 AR RNA-binding protein NOVA1/PASILLA and related KH domain proteins KOG2191
Eten_1589_orf2 A Small nuclear ribonucleoprotein E KOG1774
Eten_1604_orf3 A Spliceosome subunit KOG0796
Eten_1604_orf3 A U1 snRNP component, mediates U1 snRNP association with cap-binding complex COG5200
Eten_1643_orf4 A RNA-binding protein CUGBP1/BRUNO (RRM superfamily) KOG0144
Eten_1668_orf2 A Scaffold/matrix specific factor hnRNP-U/SAF-A, contains SPRY domain KOG2242
Eten_1736_orf1 A DEAH-box RNA helicase KOG0922
Eten_1737_orf1 A Splicing factor 3b, subunit 1 KOG0213
Eten_1737_orf1 A U2 snRNP spliceosome subunit COG5181
Eten_1738_orf1 A ATP-dependent RNA helicase KOG0339
Eten_1745_orf3 A ATP-dependent RNA helicase KOG0331
Eten_1764_orf1 A RNA helicase nonsense mRNA reducing factor (pNORF1) KOG1802
Eten_1768_orf1 A U5 snRNP spliceosome subunit KOG1795
Eten_1768_orf1 A U5 snRNP spliceosome subunit COG5178
Eten_1784_orf1 A tRNA and rRNA cytosine-C5-methylase (nucleolar protein NOL1/NOP2) KOG1122
Eten_1785_orf3 A DEAD-box protein abstrakt KOG0341
Eten_1790_orf2 AJ DEAH-box RNA helicase KOG0926
Eten_1810_orf1 A U3 small nucleolar ribonucleoprotein (snoRNP) component KOG4655
Eten_1830_orf1 AD mRNA splicing protein CDC5 (Myb superfamily) KOG0050
Eten_1830_orf1 KAD Myb superfamily proteins, including transcription factors and mRNA splicing factors COG5147
Eten_1832_orf3 A ATP-dependent RNA helicase KOG0339
Eten_2085_orf1 A Small Nuclear ribonucleoprotein splicing factor KOG1781
Eten_2086_orf2 A U5 snRNP-associated RNA splicing factor KOG2808
Eten_2099_orf2 A U2 snRNP splicing factor, small subunit, and related proteins KOG2202
Eten_2149_orf2 A Annotation not available euNOG13585
Eten_2152_orf2 A DEAH-box RNA helicase KOG0922
Eten_2182_orf1 A Spliceosomal protein snRNP-U1A/U2B KOG4206
Eten_2267_orf1 A Small nuclear ribonucleoprotein SMD1 and related snRNPs KOG3428
Eten_2382_orf1 A Small nuclear ribonucleoprotein (snRNP) Sm core protein KOG3459
Eten_2404_orf1 A Small Nuclear ribonucleoprotein splicing factor KOG1782
Eten_2527_orf1 A U6 snRNA-associated Sm-like protein KOG1775
Eten_2572_orf2 A Spliceosomal protein FBP11/Splicing factor PRP40 KOG0152
Eten_2572_orf2 A Splicing factor COG5104
Eten_2870_orf1 A Alternative splicing factor SRp20/9G8 (RRM superfamily) KOG0107
Eten_3027_orf1 A Splicing factor 3a, subunit 1 KOG0007
Eten_3088_orf3 AJ Ribosome biogenesis protein - Nop58p/Nop5p KOG2572
Eten_3138_orf1 A mRNA cleavage factor I subunit KOG1689
Eten_3190_orf3 A RNAse L inhibitor, ABC superfamily KOG0063
Eten_3211_orf1 A WD40-repeat-containing subunit of the 18S rRNA processing complex KOG1272
Eten_3291_orf2 A ATP-dependent RNA helicase KOG0337
Eten_3351_orf1 A WD40-repeat-containing subunit of the 18S rRNA processing complex KOG0291
Eten_3442_orf2 A mRNA splicing factor KOG3937
Eten_3455_orf2 A U1 small nuclear ribonucleoprotein (RRM superfamily) KOG0113
Eten_3519_orf1 A mRNA deadenylase subunit KOG0304
Eten_3519_orf1 A mRNA deadenylase subunit COG5228
Eten_3527_orf1 A Splicing factor 3a, subunit 2 KOG0227
Eten_3527_orf1 A Splicing factor 3a, subunit 2 COG5246
Eten_3543_orf1 A Small nuclear ribonucleoprotein (snRNP) LSM3 KOG3460
Eten_3559_orf1 A RNA lariat debranching enzyme KOG2863
Eten_3567_orf3 AR RNA-binding protein NOVA1/PASILLA and related KH domain proteins KOG2191
Eten_3604_orf1 A RNA helicase BRR2, DEAD-box superfamily KOG0951
Eten_3618_orf2 A mRNA splicing factor ATP-dependent RNA helicase KOG0924
Eten_3953_orf2 A U3 small nucleolar ribonucleoprotein (snoRNP) component KOG2781
Eten_3953_orf2 JA Predicted exosome subunit/U3 small nucleolar ribonucleoprotein (snoRNP) component, contains IMP4 domain COG2136
Eten_4101_orf1 A RNA helicase KOG0334
Eten_4233_orf4 A U3 small nucleolar ribonucleoprotein (snoRNP) subunit - Mpp10p KOG2600
Eten_4441_orf1 A mRNA splicing factor KOG2047
Eten_4473_orf1 A Putative u4/u6 small nuclear ribonucleoprotein KOG2769
Eten_4525_orf1 A RNA Helicase KOG0343
Eten_4526_orf2 A RNA helicase BRR2, DEAD-box superfamily KOG0951
Eten_4527_orf3 A RNA helicase BRR2, DEAD-box superfamily KOG0951
Eten_5010_orf1 A Nuclear polyadenylated RNA binding protein KOG3702
Eten_5135_orf1 A mRNA splicing factor KOG2047
Eten_5144_orf1 A Box H/ACA snoRNP component, involved in ribosomal RNA pseudouridinylation KOG3167
Eten_5230_orf2 A mRNA deadenylase, exonuclease subunit and related nucleases COG5239
Eten_5328_orf1 AJ RNA-binding translational regulator IRP (aconitase superfamily) KOG0452
Eten_5466_orf2 AJ RNA-binding translational regulator IRP (aconitase superfamily) KOG0452
Eten_5488_orf1 AJ RNA-binding translational regulator IRP (aconitase superfamily) KOG0452
Eten_5495_orf3 A Spliceosomal protein FBP11/Splicing factor PRP40 KOG0152
Eten_5495_orf3 A Splicing factor COG5104
Eten_5891_orf1 A Spliceosome subunit KOG0796
Eten_5891_orf1 A U1 snRNP component, mediates U1 snRNP association with cap-binding complex COG5200
Eten_6436_orf2 A Spliceosome subunit KOG0796
Eten_6436_orf2 A U1 snRNP component, mediates U1 snRNP association with cap-binding complex COG5200
Eten_6454_orf1 A RNA helicase BRR2, DEAD-box superfamily KOG0951
Eten_6480_orf3 AR RNA-binding protein Fusilli, contains RRM domain KOG1365
Eten_6698_orf1 A RNA helicase BRR2, DEAD-box superfamily KOG0951
Eten_6726_orf2 A DEAH-box RNA helicase KOG0922