bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_0424_orf4
Length=184
Score E
Sequences producing significant alignments: (Bits) Value
5833.PF13_0315 64.3 2e-09
> 5833.PF13_0315
Length=509
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 44/65 (67%), Gaps = 0/65 (0%)
Query 10 FGAVVSVYVXLDKESGRNKGFGFVSYTTPAAAAAAVNAMNNCLVSNKRLNVSIKKGEERH 69
FG ++S + +K +GRN+GF FVSY + +AAAA++ MN + NK+L V++KKGEE
Sbjct 392 FGELLSARIATEKNTGRNRGFAFVSYDSLESAAAAISQMNGFMALNKKLKVTVKKGEEDE 451
Query 70 AAMHL 74
++
Sbjct 452 MKKYV 456
Lambda K H
0.309 0.122 0.341
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 39517472064
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40