bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_1643_orf4
Length=166
Score E
Sequences producing significant alignments: (Bits) Value
5833.PF13_0315 206 2e-52
> 5833.PF13_0315
Length=509
Score = 206 bits (525), Expect = 2e-52, Method: Composition-based stats.
Identities = 102/166 (61%), Positives = 126/166 (75%), Gaps = 1/166 (0%)
Query 1 VEVDSLRPVFEEFGEVREVIIIRDKATGKHKSSAFVKMASIAAADNAIRALHNSRSLESA 60
+E D LRP+FEE+G V EV+IIRDK T HKSSAFVKMASI+ ADNAIR L+N ++L++
Sbjct 96 IEEDQLRPIFEEYGIVNEVVIIRDKITNVHKSSAFVKMASISEADNAIRLLNNQKTLDAQ 155
Query 61 MGPMTVKYATGEAERLGLNPQACEPGVPQAKLFVGSLPRTLKEEELKAFFQNYGNVEEVF 120
+G + VKYA+GE +LG PQ E GV QAKLF+GSLP+ + E+ +K F YG VEEVF
Sbjct 156 LGSLQVKYASGELNKLGF-PQNIESGVDQAKLFIGSLPKNITEDNIKEMFSPYGTVEEVF 214
Query 121 VMKDGATGQGKGCAFVKMSQKEAAFFAINSLNGKHLWEGCNRPMEV 166
+MKD +TG GKGC+FVK S KE A +AI SLNGK EGC RP+EV
Sbjct 215 IMKDNSTGLGKGCSFVKFSYKEQALYAIKSLNGKKTLEGCTRPVEV 260
Lambda K H
0.317 0.132 0.380
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 29876498544
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40