bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_4233_orf4 Length=233 Score E Sequences producing significant alignments: (Bits) Value 44689.DDB_0233073 67.0 5e-10 > 44689.DDB_0233073 Length=765 Score = 67.0 bits (162), Expect = 5e-10, Method: Composition-based stats. Identities = 46/175 (26%), Positives = 86/175 (49%), Gaps = 7/175 (4%) Query 9 ELNMEKPAEGLGDIYAQQYREKVLGAPSQQQQQLDQEKQQLLQLFSQIMYKCDALTNYQF 68 EL+ EK EGLGD+Y + Y ++VLG ++ +L Q+ ++ +LF+++ YK D+L+N+QF Sbjct 540 ELSDEKNTEGLGDVYEKSYMKQVLGV--EETDELKQKHIKIYELFNKLCYKLDSLSNFQF 597 Query 69 VPRXXXXXXXXXXXDAPASVRVEEAIPVYVPAASSSSSSSKAALPFTPKTAAEATREERR 128 P+ ++ +EE IP+ A SS++ + + F + E + Sbjct 598 TPKRIKDRELNIT--TANALTIEEKIPI---ATSSATMIAPEEVYFKKNADEKGESELTK 652 Query 129 AARRSKKAKRQQQLRRRIDAGELTLQQAQQRQQLLQQKNKAAKEEKKHKRLTGLT 183 R + K +QQ R D E ++ ++ +K A + K+ + +T Sbjct 653 EERVKNRKKVKQQWRDEKDEKEAEIRHKKKVDPSFAKKTTVAADMAHLKQASNVT 707 Lambda K H 0.314 0.125 0.334 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 66220486273 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40