bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_4233_orf4
Length=233
Score E
Sequences producing significant alignments: (Bits) Value
44689.DDB_0233073 67.0 5e-10
> 44689.DDB_0233073
Length=765
Score = 67.0 bits (162), Expect = 5e-10, Method: Composition-based stats.
Identities = 46/175 (26%), Positives = 86/175 (49%), Gaps = 7/175 (4%)
Query 9 ELNMEKPAEGLGDIYAQQYREKVLGAPSQQQQQLDQEKQQLLQLFSQIMYKCDALTNYQF 68
EL+ EK EGLGD+Y + Y ++VLG ++ +L Q+ ++ +LF+++ YK D+L+N+QF
Sbjct 540 ELSDEKNTEGLGDVYEKSYMKQVLGV--EETDELKQKHIKIYELFNKLCYKLDSLSNFQF 597
Query 69 VPRXXXXXXXXXXXDAPASVRVEEAIPVYVPAASSSSSSSKAALPFTPKTAAEATREERR 128
P+ ++ +EE IP+ A SS++ + + F + E +
Sbjct 598 TPKRIKDRELNIT--TANALTIEEKIPI---ATSSATMIAPEEVYFKKNADEKGESELTK 652
Query 129 AARRSKKAKRQQQLRRRIDAGELTLQQAQQRQQLLQQKNKAAKEEKKHKRLTGLT 183
R + K +QQ R D E ++ ++ +K A + K+ + +T
Sbjct 653 EERVKNRKKVKQQWRDEKDEKEAEIRHKKKVDPSFAKKTTVAADMAHLKQASNVT 707
Lambda K H
0.314 0.125 0.334
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 66220486273
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40