bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_0840_orf1 Length=166 Score E Sequences producing significant alignments: (Bits) Value 5833.MAL7P1.166 192 3e-48 > 5833.MAL7P1.166 Length=1578 Score = 192 bits (488), Expect = 3e-48, Method: Composition-based stats. Identities = 90/143 (62%), Positives = 114/143 (79%), Gaps = 1/143 (0%) Query 22 DGFRLPTGLPLNEAQRQATISAMTNRLTLVQGPPGTGKTHVACAIIDAWQRINPTKKILA 81 + LPT LPLN++Q+ A +SA+T RLTLVQGPPGTGKTHVACAIID+W + N KKILA Sbjct 1062 ESINLPTNLPLNDSQKLACLSALTRRLTLVQGPPGTGKTHVACAIIDSWHKQNSNKKILA 1121 Query 82 VADSNVAADNLMEGLSNRGIRSVRVGSGSESDLKEESIQDLPRYRDLLRMRDKN-SGEAR 140 VADSNVAA+NL+EGL R I++VRVG+GS+SD EE+I + RY+DLL++R N EA+ Sbjct 1122 VADSNVAANNLVEGLKKRNIQAVRVGAGSDSDFHEEAIMEFHRYKDLLKLRKNNMQKEAK 1181 Query 141 SLRMLLVREAVRKYNVIIATCPG 163 ++ LL EAV+KYNV+IATC G Sbjct 1182 VMKALLFLEAVKKYNVVIATCVG 1204 Lambda K H 0.317 0.134 0.391 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 29876498544 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40