bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_0791_orf1 Length=237 Score E Sequences producing significant alignments: (Bits) Value 9031.ENSGALP00000006284 69.7 8e-11 > 9031.ENSGALP00000006284 Length=342 Score = 69.7 bits (169), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 39/85 (45%), Positives = 56/85 (65%), Gaps = 8/85 (9%) Query 138 TVLRLRGMPFNANEQHIVQFFQGFHMTAILPS--TIPID--GRPSGEAYVQFSDVSETWR 193 TV+RLRG+PF +++ IVQFFQG I+P+ T+ +D GR +GEA+VQF+ Sbjct 18 TVVRLRGLPFGCSKEEIVQFFQGLE---IVPNGITLTLDYQGRSTGEAFVQFASKEIAEN 74 Query 194 ALQAKNGARMDRRYIELFPASKQEM 218 AL K+ R+ RYIE+F +SK E+ Sbjct 75 AL-GKHKERIGHRYIEIFKSSKSEI 98 Lambda K H 0.318 0.136 0.418 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 68650595861 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40