bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_1105_orf1 Length=338 Score E Sequences producing significant alignments: (Bits) Value 5833.PF13_0091 137 6e-31 > 5833.PF13_0091 Length=906 Score = 137 bits (344), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 75/248 (30%), Positives = 140/248 (56%), Gaps = 10/248 (4%) Query 2 LLAWKELSFKTTYIDVADRFHFEEWWTWMQESERDEFFQEWMFDNEQMFKDKIKQRRRED 61 LL W +L+ TTY++ A +F+ +EWW W+ E ERDE FQ++M + FK+ +++R++ Sbjct 517 LLNWDKLNECTTYVEFASQFYKQEWWEWITEKERDEVFQDFMDGYKSKFKETRRKKRKQK 576 Query 62 VAMLEEILEQNPTEFAFQKRWSEVREQLFSHPKLQNMMKIDVLQVWEEWVRHGYEQERKQ 121 + +L++ ++ T+ +W++V++ ++ KID L WE++ + E+ + Sbjct 577 MEILKQKFQEYATDNKNPLKWNDVQKYFRDDEDFHSLHKIDALAAWEDFYEKYHNVEKMK 636 Query 122 RRAQIFRRERKRRDAFRELLQEAVDKGELSSKSEWVGFARRVEKDSRYLAMVGQSGSTPR 181 + +I+R RK+R+AF ELL E + L+ K++W+ F ++ KD+RY ++G GS+PR Sbjct 637 LKKKIYRILRKKREAFIELLNEYYENNILNMKTQWIFFVSKIYKDTRYTDILGHQGSSPR 696 Query 182 ELFSDAVQQLQQQHERLKHFFKR------FADREGLDLRDKALSFTQFYETVRGLDEVKN 235 LF + + LQ+Q+ K + K+ F E + L D F + + V+ + + Sbjct 697 ILFDEFIDSLQEQYLIHKSYIKKAYKEMDFTIDENITLED----FLKTFSNVQSKYNIPD 752 Query 236 LNMLHVKL 243 NM + L Sbjct 753 ANMNFIYL 760 Lambda K H 0.315 0.127 0.368 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 124378202553 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40