bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_1105_orf1
Length=338
Score E
Sequences producing significant alignments: (Bits) Value
5833.PF13_0091 137 6e-31
> 5833.PF13_0091
Length=906
Score = 137 bits (344), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 140/248 (56%), Gaps = 10/248 (4%)
Query 2 LLAWKELSFKTTYIDVADRFHFEEWWTWMQESERDEFFQEWMFDNEQMFKDKIKQRRRED 61
LL W +L+ TTY++ A +F+ +EWW W+ E ERDE FQ++M + FK+ +++R++
Sbjct 517 LLNWDKLNECTTYVEFASQFYKQEWWEWITEKERDEVFQDFMDGYKSKFKETRRKKRKQK 576
Query 62 VAMLEEILEQNPTEFAFQKRWSEVREQLFSHPKLQNMMKIDVLQVWEEWVRHGYEQERKQ 121
+ +L++ ++ T+ +W++V++ ++ KID L WE++ + E+ +
Sbjct 577 MEILKQKFQEYATDNKNPLKWNDVQKYFRDDEDFHSLHKIDALAAWEDFYEKYHNVEKMK 636
Query 122 RRAQIFRRERKRRDAFRELLQEAVDKGELSSKSEWVGFARRVEKDSRYLAMVGQSGSTPR 181
+ +I+R RK+R+AF ELL E + L+ K++W+ F ++ KD+RY ++G GS+PR
Sbjct 637 LKKKIYRILRKKREAFIELLNEYYENNILNMKTQWIFFVSKIYKDTRYTDILGHQGSSPR 696
Query 182 ELFSDAVQQLQQQHERLKHFFKR------FADREGLDLRDKALSFTQFYETVRGLDEVKN 235
LF + + LQ+Q+ K + K+ F E + L D F + + V+ + +
Sbjct 697 ILFDEFIDSLQEQYLIHKSYIKKAYKEMDFTIDENITLED----FLKTFSNVQSKYNIPD 752
Query 236 LNMLHVKL 243
NM + L
Sbjct 753 ANMNFIYL 760
Lambda K H
0.315 0.127 0.368
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 124378202553
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40