bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_2152_orf2 Length=239 Score E Sequences producing significant alignments: (Bits) Value 4896.SPAC10F6.02c 92.8 9e-18 > 4896.SPAC10F6.02c Length=1168 Score = 92.8 bits (229), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 62/222 (27%), Positives = 103/222 (46%), Gaps = 34/222 (15%) Query 15 FGCSVEAAAVCALLGGPPVWQRPALENCGMSLKDPLVGQNRRNASAARQRLALSRALLGS 74 GCS E ++ A+L P +W RP + A RQR A + Sbjct 945 LGCSEEMLSIIAMLSVPNIWSRP----------------REKQQEADRQR-----AQFAN 983 Query 75 IEGDAVTALNVFNQYYDIESEQGAEEASRWAEKHLVDEQVMWRASKMRRVILNWMQKSGL 134 E D +T LNV+ + + + W +H + + M RA +R+ ++ M + Sbjct 984 PESDHLTLLNVYTTW------KMNRCSDNWCYEHYIQARGMRRAEDVRKQLIRLMDRYRH 1037 Query 135 PLVTCKGDCKPLLRALAAAFCLNVAKK-THDQIYRLFRLPGSASSPPFVIHPSSVLSNCA 193 P+V+C + +LRAL + + NVAK+ +H+ Y+ + P +HPS VL A Sbjct 1038 PVVSCGRKRELILRALCSGYFTNVAKRDSHEGCYKTI-----VENAPVYMHPSGVLFGKA 1092 Query 194 PPFVVYGQAFVRDGCVYMQQVTAIDPQWLPEVAPHLFTMNSA 235 +V+Y + ++ YM V+ ++P+WL EVAP F +A Sbjct 1093 AEWVIYHE-LIQTSKEYMHTVSTVNPKWLVEVAPTFFKFANA 1133 Lambda K H 0.322 0.134 0.422 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 69865650655 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40