bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_5488_orf1 Length=123 Score E Sequences producing significant alignments: (Bits) Value 3702.AT2G05710.1 171 6e-42 > 3702.AT2G05710.1 Length=990 Score = 171 bits (433), Expect = 6e-42, Method: Compositional matrix adjust. Identities = 80/121 (66%), Positives = 95/121 (78%), Gaps = 0/121 (0%) Query 2 KAGLDKALKELGFYLAGYGCMTCIGNTGEFDPEVTQAITEGDLVVASVLSGNRNFEGRIH 61 K+GL + L E GF + GYGC TCIGN+GE + V AITE D+V A+VLSGNRNFEGR+H Sbjct 580 KSGLQEYLNEQGFNIVGYGCTTCIGNSGEINESVGAAITENDIVAAAVLSGNRNFEGRVH 639 Query 62 PLTRAAYLASPPLVVAYALAGRMDIDFDTEPIGNDTEGKPVFLRDIWPTRDEIRPVIEQC 121 PLTRA YLASPPLVVAYALAG ++IDF+TEPIG GK VFLRDIWPT +EI V++ Sbjct 640 PLTRANYLASPPLVVAYALAGTVNIDFETEPIGKGKNGKDVFLRDIWPTTEEIAEVVQSS 699 Query 122 L 122 + Sbjct 700 V 700 Lambda K H 0.320 0.141 0.429 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22834639773 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40