bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_5135_orf1 Length=129 Score E Sequences producing significant alignments: (Bits) Value 5270.UM03842.1 133 1e-30 > 5270.UM03842.1 Length=1081 Score = 133 bits (335), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 61/133 (45%), Positives = 91/133 (68%), Gaps = 6/133 (4%) Query 2 DLENAAKVFERAVQATYRTIDDLASVWCEAVEMHLRHGLFKEALRLVRLAISSSR--KG- 58 DLE+A K+FE+A+ +R +DDLA +WCE EM LRH + EA+R + +++ R KG Sbjct 657 DLESARKIFEKAITIPFRRVDDLAEIWCEWAEMELRHSNYDEAIRTMARSVAPPRNTKGI 716 Query 59 ---QDTKGAQGRLFRSVKLWSLAADVEEMFGSIETVRACYDKMFQLKVITPQLVINYAHY 115 DT Q RLF+S+KLWS D+EE G +E+ + Y+KM +LK+ + Q++INYA + Sbjct 717 QYHDDTLPPQTRLFKSLKLWSFYVDLEESLGDVESTKRVYEKMLELKIASAQIIINYAAF 776 Query 116 LEERRYYEESFRV 128 LE+ +Y+EESF+V Sbjct 777 LEDNKYFEESFKV 789 Lambda K H 0.324 0.135 0.398 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22342951125 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40