bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_0134_orf4
Length=425
Score E
Sequences producing significant alignments: (Bits) Value
5833.PF14_0156 301 2e-80
> 5833.PF14_0156
Length=381
Score = 301 bits (772), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 141/236 (59%), Positives = 180/236 (76%), Gaps = 0/236 (0%)
Query 180 LQKKYGQHLLKNPGVLDKIIAAANINSSDVVLEIGPGTGNLTVRLCASAAAVRTLEIDAR 239
L KK+GQHLLKNPG+LDKII AA I SSD+VLEIG GTGNLTV+L A V T++ID+R
Sbjct 72 LYKKHGQHLLKNPGILDKIIYAAKIKSSDIVLEIGCGTGNLTVKLLPLAKKVITIDIDSR 131
Query 240 MAAEVYRRCKGLGFTNLEVEMGDCLKKELGVFDVCAANLPYQISSPFLFKLAAHKHPFRC 299
M +EV +RC G+ NLEV GD +K FDVC AN+PY+ISSP +FKL +H+ F+C
Sbjct 132 MISEVKKRCLYEGYNNLEVYEGDAIKTVFPKFDVCTANIPYKISSPLIFKLISHRPLFKC 191
Query 300 AVLMLQEEFGERLLAAAGSKNYCRLTVNVNLFLNVSRVCKVDRNSFRPPPKVDSVVVKIT 359
AVLM Q+EF ER+LA G NY RLT+NV LF V++VC V+R+SF PPPKVDSV+VK+
Sbjct 192 AVLMFQKEFAERMLANVGDSNYSRLTINVKLFCKVTKVCNVNRSSFNPPPKVDSVIVKLI 251
Query 360 PKREVLPVDFYEWNGLLRLCFSRKRKTIRSIFKQPSVLSFLETNHKLFCSLNKKLP 415
PK +F EW+ LLR+CFSRKRKT+ +IFK+ +VL+ LE N+K +C+LNK++P
Sbjct 252 PKESSFLTNFDEWDNLLRICFSRKRKTLHAIFKRNAVLNMLEHNYKNWCTLNKQVP 307
Lambda K H
0.322 0.134 0.387
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 173502472710
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40