bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_0134_orf4 Length=425 Score E Sequences producing significant alignments: (Bits) Value 5833.PF14_0156 301 2e-80 > 5833.PF14_0156 Length=381 Score = 301 bits (772), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 141/236 (59%), Positives = 180/236 (76%), Gaps = 0/236 (0%) Query 180 LQKKYGQHLLKNPGVLDKIIAAANINSSDVVLEIGPGTGNLTVRLCASAAAVRTLEIDAR 239 L KK+GQHLLKNPG+LDKII AA I SSD+VLEIG GTGNLTV+L A V T++ID+R Sbjct 72 LYKKHGQHLLKNPGILDKIIYAAKIKSSDIVLEIGCGTGNLTVKLLPLAKKVITIDIDSR 131 Query 240 MAAEVYRRCKGLGFTNLEVEMGDCLKKELGVFDVCAANLPYQISSPFLFKLAAHKHPFRC 299 M +EV +RC G+ NLEV GD +K FDVC AN+PY+ISSP +FKL +H+ F+C Sbjct 132 MISEVKKRCLYEGYNNLEVYEGDAIKTVFPKFDVCTANIPYKISSPLIFKLISHRPLFKC 191 Query 300 AVLMLQEEFGERLLAAAGSKNYCRLTVNVNLFLNVSRVCKVDRNSFRPPPKVDSVVVKIT 359 AVLM Q+EF ER+LA G NY RLT+NV LF V++VC V+R+SF PPPKVDSV+VK+ Sbjct 192 AVLMFQKEFAERMLANVGDSNYSRLTINVKLFCKVTKVCNVNRSSFNPPPKVDSVIVKLI 251 Query 360 PKREVLPVDFYEWNGLLRLCFSRKRKTIRSIFKQPSVLSFLETNHKLFCSLNKKLP 415 PK +F EW+ LLR+CFSRKRKT+ +IFK+ +VL+ LE N+K +C+LNK++P Sbjct 252 PKESSFLTNFDEWDNLLRICFSRKRKTLHAIFKRNAVLNMLEHNYKNWCTLNKQVP 307 Lambda K H 0.322 0.134 0.387 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 173502472710 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40