bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_4526_orf2 Length=239 Score E Sequences producing significant alignments: (Bits) Value 5833.PF13_0102 288 7e-77 > 5833.PF13_0102 Length=651 Score = 288 bits (738), Expect = 7e-77, Method: Compositional matrix adjust. Identities = 126/237 (53%), Positives = 180/237 (75%), Gaps = 0/237 (0%) Query 3 KKNYEKYGNPDGPGGMKIGVGLPRFLVEETNQIFVLSFFFLFLLVVLPMIFLCYYQRQKK 62 K+NYEKYGNPDGPG MK+G+GLP+ L++E Q+ +LS FFL LV +P F+ YYQ+QK+ Sbjct 187 KENYEKYGNPDGPGMMKVGIGLPKLLIDEKYQLLILSIFFLIFLVFIPATFIIYYQKQKQ 246 Query 63 YAPNGVMVETVQFLTHVMTDGTRLKNLPELMAASGESRAMKIERDDDKDMKQICDAVVEA 122 Y PNGV +ET+Q+LT+ + + +R K+ PE++AA+ ESR +++++DD++ +K + + ++E Sbjct 247 YGPNGVKIETLQYLTYTINENSRSKSFPEMLAATAESRDIEMKKDDEQYIKTLMEELIEP 306 Query 123 KKRIFTVPVIVRNCYLINAHMQRLHELMSPRLKKELNQLLKDSLPITQCMMEISVLSDWY 182 KKR F +PVI +N +LI AHMQR H+L+S LKK+L +LK SL IT M+EIS+L DW+ Sbjct 307 KKRTFKIPVITKNYFLILAHMQRRHDLLSEDLKKDLEHILKFSLLITHSMIEISILRDWF 366 Query 183 LTADSVLEFRRCLIQAINGRTQSLFQIPHFDEEVVRHCHRGKHVIRELSEFLRQEGE 239 LTA S L FRRCLIQA + SL QIPHFDE +VRH H+GK ++E+ +F+ Q+ E Sbjct 367 LTAQSALTFRRCLIQAFEAKNSSLLQIPHFDENIVRHVHKGKFSVKEVLDFVHQDHE 423 Lambda K H 0.325 0.140 0.418 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 69865650655 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40