bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_6480_orf3
Length=166
Score E
Sequences producing significant alignments: (Bits) Value
5807.cgd1_350 97.4 1e-19
> 5807.cgd1_350
Length=569
Score = 97.4 bits (241), Expect = 1e-19, Method: Composition-based stats.
Identities = 51/136 (37%), Positives = 78/136 (57%), Gaps = 5/136 (3%)
Query 17 IRLRGLPWDVNEDAIIRFVKPVVEIRESDVCVCVGLNKRVTGEAYVNVHTTEMRDMAVRM 76
+RLRGLPW II F P+ I D+ + + ++TGEAYV + + + ++++ +
Sbjct 318 VRLRGLPWKAAVLDIIAFFNPICRISSYDIAISYNKDGKMTGEAYVLLPSIKAYELSLTL 377
Query 77 LHGRMMGARWIEVFRSSAEDFERAQQ----RRVAMLSSDSRDGRDADVKVLNLTVLKLRG 132
LHG+ MG RWIEV SS ++F Q ++ S D + D + N +VL+LRG
Sbjct 378 LHGKRMGKRWIEVLPSSTKEFLICLQITSLKKQNQNPSIFNDNKIID-RYYNRSVLRLRG 436
Query 133 LPWTCTEMNVVNFFKS 148
LPW+ TE+ +V FF S
Sbjct 437 LPWSTTEIEIVQFFIS 452
Lambda K H
0.324 0.137 0.429
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 29876498544
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40