bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_1389_orf1 Length=190 Score E Sequences producing significant alignments: (Bits) Value 5833.PF10_0085 125 7e-28 > 5833.PF10_0085 Length=469 Score = 125 bits (314), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 69/144 (47%), Positives = 86/144 (59%), Gaps = 30/144 (20%) Query 6 ASTIQILGAEKALFRALKTKSNTPKYGIIYHAALVGQATPKLKGKISRVLAAKLSLCVRV 65 +ST+QILG+EKALFRALKTKS TPKYG+IYHA LVGQ PKLKG+ISR LAAKLSLC RV Sbjct 316 SSTLQILGSEKALFRALKTKSKTPKYGLIYHATLVGQTAPKLKGRISRSLAAKLSLCTRV 375 Query 66 DALTEAAEVAAAAAGGSAANGNSAAAPQGPAEPTVAIACRRYVENRLEQLEQQLAGSGPK 125 DAL GN EP++AI C+ ++E RLE + L Sbjct 376 DAL-----------------GNF-------VEPSIAITCKSHLEKRLEYITSNLQKKLSN 411 Query 126 PPSKPAFQ------RYEPHRETNG 143 P + Q +Y P+++ +G Sbjct 412 PNNNVKAQQQGQQNKYNPNQKNDG 435 Lambda K H 0.307 0.123 0.331 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 42433428525 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40