bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_3559_orf1 Length=131 Score E Sequences producing significant alignments: (Bits) Value 31033.SINFRUP00000155308 160 1e-38 > 31033.SINFRUP00000155308 Length=555 Score = 160 bits (405), Expect = 1e-38, Method: Composition-based stats. Identities = 64/113 (56%), Positives = 91/113 (80%), Gaps = 0/113 (0%) Query 16 MKVAINGCCHGELDALYEMLQQLEEKENIKVDLLICCGDFQSLRSEADLQYFHAPPKYKK 75 MK+A+ GCCHGELD +YE + +E+KE +KVDLL+CCGDFQ++R+E D++ P KY+ Sbjct 1 MKIAVEGCCHGELDKIYETIAYMEKKEGVKVDLLLCCGDFQAVRNEEDMKCMAVPAKYRT 60 Query 76 LKDFHLYFRGLKRAPRLTLLVGGNHEAPNVLRQLYYGGWLAPNIFFLGYSGVV 128 ++ F+ Y+ G K+AP LT+ +GGNHEA N L++L YGGW+APNI+FLGY+G+V Sbjct 61 MQTFYKYYSGEKKAPVLTIFIGGNHEASNHLQELPYGGWVAPNIYFLGYAGIV 113 Lambda K H 0.322 0.143 0.443 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22935578866 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40