bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_1785_orf3
Length=319
Score E
Sequences producing significant alignments: (Bits) Value
5833.PFE1390w 358 1e-97
> 5833.PFE1390w
Length=665
Score = 358 bits (919), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 163/286 (56%), Positives = 220/286 (76%), Gaps = 0/286 (0%)
Query 33 RLDFRKTLLATSRKLRQEAEKNKKDVVQEIEEEEQRILEQVSKSLGAPLQGVRERAKGIV 92
++DFRKTLL T K+R E + ++ D +EI + E+++L QVSK+L APLQ V+ERAKGIV
Sbjct 114 KVDFRKTLLETFHKIRLEKKNDEIDETEEIRKREEKLLAQVSKALNAPLQSVKERAKGIV 173
Query 93 YSKRMATSWTMPSKYREMTEAEAQEVRERFFVDVNGTDVPPPFRNFKDMCFPQPILDALK 152
Y + + + W +P KY+ + ++ +++R F++DVNG D+P P +NFKDM FP+ IL L+
Sbjct 174 YKENVESIWKLPKKYKLLKKSYVEKIRRIFYIDVNGDDIPAPIKNFKDMKFPKAILKGLR 233
Query 153 KKNITAPTQIQMQGIPALLQGRDLIGIAFTGSGKTLVFTLPMLMGALESEMRSPYIAGEG 212
KKNI PTQIQMQG+P++L GRD+IGIAFTGSGKT+VF LP++M LE+E+R GEG
Sbjct 234 KKNIKKPTQIQMQGLPSILLGRDIIGIAFTGSGKTIVFVLPLIMKCLEAEIRCKLEEGEG 293
Query 213 PWGLVVCPSRELASQTTDVVNFFATALHEGGYPQLRCLCMIGGVSTQEQATFIRNGVHCV 272
P GL++CPSRELA+QT +++ +F L++ +P LR LCMIGG+S EQ I+ G+H +
Sbjct 294 PIGLIICPSRELATQTHNIIKYFCEFLYKDNFPTLRSLCMIGGISAYEQGREIQKGIHMI 353
Query 273 VATPGRLTDMLNKRRMGLNQCRYLAFDEADRMVDMGFEEEVRNVLD 318
VATPGRL DMLNK+RM L QCRYL FDEADR++D+GFEEEVRN LD
Sbjct 354 VATPGRLNDMLNKKRMTLEQCRYLCFDEADRLIDLGFEEEVRNTLD 399
Lambda K H
0.318 0.134 0.387
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 114140509963
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40