bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_1785_orf3 Length=319 Score E Sequences producing significant alignments: (Bits) Value 5833.PFE1390w 358 1e-97 > 5833.PFE1390w Length=665 Score = 358 bits (919), Expect = 1e-97, Method: Compositional matrix adjust. Identities = 163/286 (56%), Positives = 220/286 (76%), Gaps = 0/286 (0%) Query 33 RLDFRKTLLATSRKLRQEAEKNKKDVVQEIEEEEQRILEQVSKSLGAPLQGVRERAKGIV 92 ++DFRKTLL T K+R E + ++ D +EI + E+++L QVSK+L APLQ V+ERAKGIV Sbjct 114 KVDFRKTLLETFHKIRLEKKNDEIDETEEIRKREEKLLAQVSKALNAPLQSVKERAKGIV 173 Query 93 YSKRMATSWTMPSKYREMTEAEAQEVRERFFVDVNGTDVPPPFRNFKDMCFPQPILDALK 152 Y + + + W +P KY+ + ++ +++R F++DVNG D+P P +NFKDM FP+ IL L+ Sbjct 174 YKENVESIWKLPKKYKLLKKSYVEKIRRIFYIDVNGDDIPAPIKNFKDMKFPKAILKGLR 233 Query 153 KKNITAPTQIQMQGIPALLQGRDLIGIAFTGSGKTLVFTLPMLMGALESEMRSPYIAGEG 212 KKNI PTQIQMQG+P++L GRD+IGIAFTGSGKT+VF LP++M LE+E+R GEG Sbjct 234 KKNIKKPTQIQMQGLPSILLGRDIIGIAFTGSGKTIVFVLPLIMKCLEAEIRCKLEEGEG 293 Query 213 PWGLVVCPSRELASQTTDVVNFFATALHEGGYPQLRCLCMIGGVSTQEQATFIRNGVHCV 272 P GL++CPSRELA+QT +++ +F L++ +P LR LCMIGG+S EQ I+ G+H + Sbjct 294 PIGLIICPSRELATQTHNIIKYFCEFLYKDNFPTLRSLCMIGGISAYEQGREIQKGIHMI 353 Query 273 VATPGRLTDMLNKRRMGLNQCRYLAFDEADRMVDMGFEEEVRNVLD 318 VATPGRL DMLNK+RM L QCRYL FDEADR++D+GFEEEVRN LD Sbjct 354 VATPGRLNDMLNKKRMTLEQCRYLCFDEADRLIDLGFEEEVRNTLD 399 Lambda K H 0.318 0.134 0.387 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 114140509963 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40