bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Eten_2099_orf2
Length=265
Score E
Sequences producing significant alignments: (Bits) Value
5833.PF11_0200 363 3e-99
> 5833.PF11_0200
Length=294
Score = 363 bits (931), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 173/276 (62%), Positives = 210/276 (76%), Gaps = 28/276 (10%)
Query 14 MAEHLARIIGTEEDRVNCPFYWKIGACRHGDQCSRSHYKPSSSPTIVLRHMYPNPPVAIA 73
MAEHLARIIGTEEDRVNCPF+WKIGACRHGDQCSRSHYKP+ + T+V+RHMY NPP+A+A
Sbjct 1 MAEHLARIIGTEEDRVNCPFFWKIGACRHGDQCSRSHYKPNCAQTLVIRHMYDNPPIAVA 60
Query 74 IAEGQNVSDELLDEAADHFEAFFSEVFEELYKYGEVEDMVVCDNIGDHIIGNVYVKYSDD 133
IAEGQ V DE+LD+AADHFE F+ EVF+EL KYGE+EDMVVCDNIGDHIIGNVY+KY+ +
Sbjct 61 IAEGQMVEDEVLDKAADHFEEFYEEVFDELMKYGEIEDMVVCDNIGDHIIGNVYIKYTHE 120
Query 134 DAAKKALSALQGRYYAGKPIQAEFTPVTDFREARCRQFVDGQCRRGGYCNFMHLKHVPRS 193
D A+KA++ L GR+YAGKP+Q E+TPVTDFREARCRQFV+GQCRRGGYCNFMH+KHVPR+
Sbjct 121 DYAEKAVNELNGRFYAGKPLQIEYTPVTDFREARCRQFVEGQCRRGGYCNFMHIKHVPRT 180
Query 194 LKRKLFNKMYEEHPEYRQRV-------RGGRRSRSRSGSP--HKHRRSPSLHRPERPE-- 242
+KRKLF +MY+++PEY++R GRR R G + RRS + +R
Sbjct 181 VKRKLFRRMYKKYPEYKKRRARKDDSDDDGRRESYREGKDKYKRDRRSSHHYSSKRKNRS 240
Query 243 -----------------RRTSEERRAMIAQWNQERD 261
R S ERR I +WN+ER+
Sbjct 241 DNEDDDDDEERSYKHARRENSAERREKIERWNKERE 276
Lambda K H
0.320 0.135 0.419
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 83755957455
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40