bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_2099_orf2 Length=265 Score E Sequences producing significant alignments: (Bits) Value 5833.PF11_0200 363 3e-99 > 5833.PF11_0200 Length=294 Score = 363 bits (931), Expect = 3e-99, Method: Compositional matrix adjust. Identities = 173/276 (62%), Positives = 210/276 (76%), Gaps = 28/276 (10%) Query 14 MAEHLARIIGTEEDRVNCPFYWKIGACRHGDQCSRSHYKPSSSPTIVLRHMYPNPPVAIA 73 MAEHLARIIGTEEDRVNCPF+WKIGACRHGDQCSRSHYKP+ + T+V+RHMY NPP+A+A Sbjct 1 MAEHLARIIGTEEDRVNCPFFWKIGACRHGDQCSRSHYKPNCAQTLVIRHMYDNPPIAVA 60 Query 74 IAEGQNVSDELLDEAADHFEAFFSEVFEELYKYGEVEDMVVCDNIGDHIIGNVYVKYSDD 133 IAEGQ V DE+LD+AADHFE F+ EVF+EL KYGE+EDMVVCDNIGDHIIGNVY+KY+ + Sbjct 61 IAEGQMVEDEVLDKAADHFEEFYEEVFDELMKYGEIEDMVVCDNIGDHIIGNVYIKYTHE 120 Query 134 DAAKKALSALQGRYYAGKPIQAEFTPVTDFREARCRQFVDGQCRRGGYCNFMHLKHVPRS 193 D A+KA++ L GR+YAGKP+Q E+TPVTDFREARCRQFV+GQCRRGGYCNFMH+KHVPR+ Sbjct 121 DYAEKAVNELNGRFYAGKPLQIEYTPVTDFREARCRQFVEGQCRRGGYCNFMHIKHVPRT 180 Query 194 LKRKLFNKMYEEHPEYRQRV-------RGGRRSRSRSGSP--HKHRRSPSLHRPERPE-- 242 +KRKLF +MY+++PEY++R GRR R G + RRS + +R Sbjct 181 VKRKLFRRMYKKYPEYKKRRARKDDSDDDGRRESYREGKDKYKRDRRSSHHYSSKRKNRS 240 Query 243 -----------------RRTSEERRAMIAQWNQERD 261 R S ERR I +WN+ER+ Sbjct 241 DNEDDDDDEERSYKHARRENSAERREKIERWNKERE 276 Lambda K H 0.320 0.135 0.419 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 83755957455 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40