bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Eten_1074_orf1 Length=146 Score E Sequences producing significant alignments: (Bits) Value 44689.DDB_0233171 143 2e-33 > 44689.DDB_0233171 Length=1256 Score = 143 bits (360), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 67/146 (45%), Positives = 93/146 (63%), Gaps = 0/146 (0%) Query 1 GKKRLLKKCEYKNLPSGIVFLKVCGDRIFAGDMSESIHVIKYKANANLFYVLCDDTGPRW 60 GKK+LL+KCE KNLP+ IV + GDR+ GD+ ESIH IKYK + N+ YV DD PRW Sbjct 1012 GKKKLLRKCETKNLPNTIVNIHSLGDRLVVGDIQESIHFIKYKRSENMLYVFADDLAPRW 1071 Query 61 LTRGEVLDYHSIVAADKFDSIFIERVPSEARQDEGGDSTGLKLRGDTAYMTDSCHKLDTV 120 +T +LDY ++ ADKF +IF+ R+P + D TG KL+ ++ + + HKLD + Sbjct 1072 MTSSVMLDYDTVAGADKFGNIFVLRLPLLISDEVEEDPTGTKLKFESGTLNGAPHKLDHI 1131 Query 121 LQFHVGETVTGLRRATLSTGASEAIV 146 F VG+TVT L + +L G E I+ Sbjct 1132 ANFFVGDTVTTLNKTSLVVGGPEVIL 1157 Lambda K H 0.320 0.137 0.408 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22393349475 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40