Quantification of functional classes


Blast result Functional classes RNA processing and modification - related function(s) Group code
Emax_2256_orf3 A RNA helicase BRR2, DEAD-box superfamily KOG0951
Emax_2709_orf4 A Alternative splicing factor SRp20/9G8 (RRM superfamily) KOG0107
Emax_3139_orf2 A RNA-binding protein musashi/mRNA cleavage and polyadenylation factor I complex, subunit HRP1 KOG4205
Emax_3154_orf2 A RNAse L inhibitor, ABC superfamily KOG0063
Emax_0405_orf2 A RNA helicase BRR2, DEAD-box superfamily KOG0951
Emax_1646_orf1 A RNA-binding protein CUGBP1/BRUNO (RRM superfamily) KOG0144
Emax_2364_orf1 A mRNA deadenylase subunit KOG0304
Emax_2404_orf1 A ATP-dependent RNA helicase KOG0329
Emax_2603_orf1 A Splicing factor 3a, subunit 2 KOG0227
Emax_2747_orf1 A Spliceosome subunit KOG0796
Emax_2847_orf1 A RNA helicase BRR2, DEAD-box superfamily KOG0951
Emax_2858_orf1 A RNA helicase BRR2, DEAD-box superfamily KOG0951
Emax_3241_orf2 A ATP-dependent RNA helicase A KOG0920
Emax_3322_orf1 A U5 snRNP-like RNA helicase subunit KOG0333
Emax_3390_orf2 A Predicted snRNP core protein KOG3448
Emax_0002_orf1 A ATP-dependent RNA helicase KOG0335
Emax_0019_orf3 AR RNA-binding protein Fusilli, contains RRM domain KOG1365
Emax_0021_orf1 A ATP-dependent RNA helicase KOG0335
Emax_0094_orf1 A mRNA export protein (contains WD40 repeats) KOG0647
Emax_0284_orf2 A U2 snRNP splicing factor, small subunit, and related proteins KOG2202
Emax_0425_orf1 A RNA helicase KOG0334
Emax_0510_orf1 AD mRNA splicing protein CDC5 (Myb superfamily) KOG0050
Emax_0531_orf3 A RNA-binding nuclear protein (MAK16) containing a distinct C4 Zn-finger KOG3064
Emax_0538_orf1 A mRNA cleavage and polyadenylation factor I complex, subunit RNA15 KOG0108
Emax_0546_orf1 A Small Nuclear ribonucleoprotein splicing factor KOG1782
Emax_0649_orf1 A Polyadenylation factor I complex, subunit, Yth1 (CPSF subunit) KOG1040
Emax_0691_orf1 A ATP-dependent RNA helicase KOG0344
Emax_0732_orf1 A RNA-binding protein musashi/mRNA cleavage and polyadenylation factor I complex, subunit HRP1 KOG4205
Emax_0858_orf2 A mRNA cleavage factor I subunit KOG1689
Emax_0871_orf1 A Splicing factor 3a, subunit 3 KOG2636
Emax_0891_orf1 A RRM motif-containing protein KOG0533
Emax_0939_orf2 A Cytoplasmic exosomal RNA helicase SKI2, DEAD-box superfamily KOG0947
Emax_0950_orf2 AR RNA-binding protein NOVA1/PASILLA and related KH domain proteins KOG2191
Emax_0988_orf1 A U5 snRNP spliceosome subunit KOG1795
Emax_0990_orf1 A U5 snRNP-associated RNA splicing factor KOG2808
Emax_1045_orf3 A Predicted splicing factor, SR protein superfamily KOG4207
Emax_1089_orf1 A Splicing factor U2AF, large subunit (RRM superfamily) KOG0120
Emax_1102_orf1 A Poly(A) polymerase and related nucleotidyltransferases KOG2245
Emax_1169_orf1 A Predicted RNA methylase involved in rRNA processing KOG3045
Emax_1177_orf1 AJ RNA-binding translational regulator IRP (aconitase superfamily) KOG0452
Emax_1182_orf1 A mRNA splicing factor KOG2047
Emax_1267_orf1 A Splicing factor 3a, subunit 1 KOG0007
Emax_1345_orf1 A mRNA splicing factor KOG3068
Emax_1421_orf1 AB mRNA splicing factor/probable chromatin binding snw family nuclear protein KOG2441
Emax_1506_orf1 A U5 snRNP spliceosome subunit KOG1795
Emax_1536_orf1 A RNA helicase nonsense mRNA reducing factor (pNORF1) KOG1802
Emax_1655_orf1 A mRNA splicing factor KOG3937
Emax_1681_orf1 A U6 snRNA-associated Sm-like protein KOG1775
Emax_1806_orf1 A RNA-binding protein musashi/mRNA cleavage and polyadenylation factor I complex, subunit HRP1 KOG4205
Emax_1862_orf1 AJ Ribosome biogenesis protein - Nop58p/Nop5p KOG2572
Emax_1872_orf1 A tRNA and rRNA cytosine-C5-methylase (nucleolar protein NOL1/NOP2) KOG1122
Emax_2027_orf2 A Splicing factor 3a, subunit 3 KOG2636
Emax_2184_orf1 AJ Polyadenylate-binding protein (RRM superfamily) KOG0123
Emax_2196_orf1 A Oligoribonuclease (3'->5' exoribonuclease) KOG3242
Emax_2207_orf1 A ATP-dependent RNA helicase KOG0329
Emax_2240_orf1 A RNA helicase nonsense mRNA reducing factor (pNORF1) KOG1802
Emax_2307_orf1 A Ribosomal protein RPL1/RPL2/RL4L4 KOG1475
Emax_2390_orf1 AJ Polyadenylate-binding protein (RRM superfamily) KOG0123
Emax_2413_orf2 A HAT repeat protein KOG0495
Emax_2427_orf1 A ATP-dependent RNA helicase KOG0326
Emax_2428_orf1 A Splicing factor 3b, subunit 1 KOG0213
Emax_2541_orf1 A mRNA deadenylase subunit KOG0304
Emax_2699_orf1 A RNA-binding protein CUGBP1/BRUNO (RRM superfamily) KOG0144
Emax_2737_orf2 A mRNA splicing factor KOG2047
Emax_2896_orf1 A RNA-binding protein musashi/mRNA cleavage and polyadenylation factor I complex, subunit HRP1 KOG4205
Emax_2910_orf1 A U4/U6.U5 snRNP associated protein KOG2217
Emax_3054_orf1 A U5 snRNP-like RNA helicase subunit KOG0333
Emax_3174_orf1 A ATP-dependent RNA helicase KOG0329