bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: kyva 112,920 sequences; 47,500,486 total letters Query= Emax_2858_orf1 Length=93 Score E Sequences producing significant alignments: (Bits) Value 7294212 90.5 7e-19 CE21971 82.4 2e-16 At1g20960 73.6 8e-14 Hs22042312 73.6 8e-14 At2g42270 70.1 8e-13 SPAC9.03c 67.0 8e-12 CE26820 27.3 7.7 > 7294212 Length=678 Score = 90.5 bits (223), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 44/83 (53%), Positives = 57/83 (68%), Gaps = 0/83 (0%) Query 7 FFYRPTTRVTNQVYEQLLVVLQQQLGDRPDEVLRGAADEVLQVLKEDGLKEGERKRGVEG 66 YRP T+ T Q YE LL +Q+ LGD+P ++L GAADE+L VLK D LK+ ERK+ ++ Sbjct 100 IVYRPKTQETRQTYEVLLSFIQEALGDQPRDILCGAADEILAVLKNDRLKDRERKKDIDS 159 Query 67 VLGPITQERFTKLFQLSKSITDF 89 +LG +T ERF L L K ITDF Sbjct 160 LLGAVTDERFALLVNLGKKITDF 182 > CE21971 Length=2145 Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 41/81 (50%), Positives = 53/81 (65%), Gaps = 0/81 (0%) Query 9 YRPTTRVTNQVYEQLLVVLQQQLGDRPDEVLRGAADEVLQVLKEDGLKEGERKRGVEGVL 68 Y+P T+ T Q YE +L + LGD P EVL GAADEVL LK D ++ E+K+ VE +L Sbjct 97 YKPRTQETKQTYEVILSFILDALGDVPREVLCGAADEVLLTLKNDKFRDKEKKKEVEALL 156 Query 69 GPITQERFTKLFQLSKSITDF 89 GP+T +R L LSK I+DF Sbjct 157 GPLTDDRIAVLINLSKKISDF 177 > At1g20960 Length=2171 Score = 73.6 bits (179), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 35/86 (40%), Positives = 53/86 (61%), Gaps = 0/86 (0%) Query 4 TENFFYRPTTRVTNQVYEQLLVVLQQQLGDRPDEVLRGAADEVLQVLKEDGLKEGERKRG 63 T++ Y+P T+ T YE +L ++Q+QLG +P ++ GAADE+L VLK D + E+K Sbjct 105 TDDAVYQPKTKETRAAYEAMLGLIQKQLGGQPPSIVSGAADEILAVLKNDAFRNPEKKME 164 Query 64 VEGVLGPITQERFTKLFQLSKSITDF 89 +E +L I F +L + K ITDF Sbjct 165 IEKLLNKIENHEFDQLVSIGKLITDF 190 > Hs22042312 Length=2136 Score = 73.6 bits (179), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 36/83 (43%), Positives = 53/83 (63%), Gaps = 0/83 (0%) Query 7 FFYRPTTRVTNQVYEQLLVVLQQQLGDRPDEVLRGAADEVLQVLKEDGLKEGERKRGVEG 66 Y+P T+ T + YE LL +Q LGD+P ++L GAADEVL VLK + L++ ER++ ++ Sbjct 100 IIYKPKTKETRETYEVLLSFIQAALGDQPRDILCGAADEVLAVLKNEKLRDKERRKEIDL 159 Query 67 VLGPITQERFTKLFQLSKSITDF 89 +LG R+ L L K ITD+ Sbjct 160 LLGQTDDTRYHVLVNLGKKITDY 182 > At2g42270 Length=2172 Score = 70.1 bits (170), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 35/86 (40%), Positives = 57/86 (66%), Gaps = 0/86 (0%) Query 4 TENFFYRPTTRVTNQVYEQLLVVLQQQLGDRPDEVLRGAADEVLQVLKEDGLKEGERKRG 63 TE+ Y+P T+ T +E +L ++QQQLG +P +++ GAADE+L VLK + +K E+K Sbjct 105 TEDGVYQPKTKETRVAFEIMLGLIQQQLGGQPLDIVCGAADEILAVLKNESVKNHEKKVE 164 Query 64 VEGVLGPITQERFTKLFQLSKSITDF 89 +E +L IT + F++ + K ITD+ Sbjct 165 IEKLLNVITDQVFSQFVSIGKLITDY 190 > SPAC9.03c Length=2176 Score = 67.0 bits (162), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 36/89 (40%), Positives = 55/89 (61%), Gaps = 1/89 (1%) Query 2 DVTENFFYRPTTRVTNQVYEQLLVVLQQQLGDRPDEVLRGAADEVLQVLKEDGLKEGERK 61 D E Y P T T +VY+ +L +QQ LGD+ E+LR AAD ++++LK+ L E RK Sbjct 124 DSFEILKYNPLTDETREVYDYILSFIQQYLGDQSPEILRSAADLIIELLKDSSLDEQGRK 183 Query 62 RGVEGVLGP-ITQERFTKLFQLSKSITDF 89 + +E VL + Q+RF++L L +TD+ Sbjct 184 KQIEEVLSTELPQDRFSQLVNLGNRLTDY 212 > CE26820 Length=467 Score = 27.3 bits (59), Expect = 7.7, Method: Composition-based stats. Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 6/77 (7%) Query 10 RPTTRVTNQVYEQLLVVLQQQLGDRPDEVLRGAADEVLQVLKEDGLKEGER----KRGVE 65 RP+T ++ Q+ + L ++ ++ DE +R + D LQ+ E+ K+ +R K+G Sbjct 186 RPSTATEEEMQLQIALALSREECEKADE-MRKSDDARLQMALEESQKDADRLATTKQGTV 244 Query 66 GVLGPITQERFTKLFQL 82 G +TQ L L Sbjct 245 SS-GQLTQSALDDLLSL 260 Lambda K H 0.317 0.137 0.373 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1167934574 Database: kyva Posted date: Jul 3, 2009 9:03 AM Number of letters in database: 47,500,486 Number of sequences in database: 112,920 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40