bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.24+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: kyva
           112,920 sequences; 47,500,486 total letters



Query=  Eten_8658_orf2
Length=119
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  YBR006w                                                             28.9    2.5


> YBR006w
Length=497

 Score = 28.9 bits (63),  Expect = 2.5, Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 36/79 (45%), Gaps = 7/79 (8%)

Query  22   PGSSPAAAASPPAAAAAAVGCVLSSLRVKYIGGDSESSRAAAAAAVSAES-SSPASAVAA  80
            P + P+A  +  AAAA AVGC +       I  DS++  +A A A  AE    P  +   
Sbjct  162  PWNFPSAMITRKAAAALAVGCTVV------IKPDSQTPLSALAMAYLAEKAGFPKGSFNV  215

Query  81   AASAAATAAVGCTSSSSQK  99
              S A T  +G T   S K
Sbjct  216  ILSHANTPKLGKTLCESPK  234



Lambda     K      H
   0.301    0.107    0.269 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 1164469306


  Database: kyva
    Posted date:  Jul 3, 2009  9:03 AM
  Number of letters in database: 47,500,486
  Number of sequences in database:  112,920



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40