bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: kyva
112,920 sequences; 47,500,486 total letters
Query= Eten_8567_orf3
Length=107
Score E
Sequences producing significant alignments: (Bits) Value
Hs22043238 32.3 0.21
Hs7019419 32.0 0.30
7299934_1 29.6 1.2
YIL131c 28.9 2.6
Hs20070125 28.9 2.6
CE28680 28.5 2.9
> Hs22043238
Length=404
Score = 32.3 bits (72), Expect = 0.21, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 10/56 (17%)
Query 18 MTNATGEEVWE----SAGEGSQKG-----QKRFRQIFVGGQVVGEGAYA-QGLVHA 63
+ N+T +E+W+ G G++KG +K+ R+ GQ++GEG Y GL+ A
Sbjct 156 LGNSTADELWKGVLAETGAGARKGRGSRTKKKRRKDLNRGQIIGEGHYGFCGLIDA 211
> Hs7019419
Length=731
Score = 32.0 bits (71), Expect = 0.30, Method: Composition-based stats.
Identities = 15/29 (51%), Positives = 17/29 (58%), Gaps = 0/29 (0%)
Query 7 PQMHCRVVPPQMTNATGEEVWESAGEGSQ 35
P VVP N GEEV E+AGEGS+
Sbjct 475 PSSSLEVVPEAAQNNPGEEVTETAGEGSE 503
> 7299934_1
Length=489
Score = 29.6 bits (65), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Query 56 YAQGLVHAPVSNSIDPRNDP--AAAPARSAAAAAAVAAAAAP 95
Y G +H PV+N ++P ++P AA R+ +A VA P
Sbjct 132 YLAGRLHKPVTNLVNPSDNPPLKAALERNLVSALQVALLLLP 173
> YIL131c
Length=484
Score = 28.9 bits (63), Expect = 2.6, Method: Composition-based stats.
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 0/37 (0%)
Query 59 GLVHAPVSNSIDPRNDPAAAPARSAAAAAAVAAAAAP 95
G + AP S+SIDPR A +S A +++ +AP
Sbjct 417 GEIPAPESSSIDPRGIKAQKVKKSLQATSSILGESAP 453
> Hs20070125
Length=508
Score = 28.9 bits (63), Expect = 2.6, Method: Composition-based stats.
Identities = 24/107 (22%), Positives = 40/107 (37%), Gaps = 16/107 (14%)
Query 3 DFYSPQM-HCRVVPPQMTNATGE-------------EVWESAGEGSQKGQKRFRQI--FV 46
+FY+P HC+ + P+ A G+ + E + Q G + + I F
Sbjct 47 EFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATEESDLAQQYGVRGYPTIKFFR 106
Query 47 GGQVVGEGAYAQGLVHAPVSNSIDPRNDPAAAPARSAAAAAAVAAAA 93
G Y G + N + R PAA AAA ++ ++
Sbjct 107 NGDTASPKEYTAGREADDIVNWLKKRTGPAATTLPDGAAAESLVESS 153
> CE28680
Length=925
Score = 28.5 bits (62), Expect = 2.9, Method: Composition-based stats.
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 5/46 (10%)
Query 2 QDFYSPQMHCRVVPPQMTNATGEEV---WESAGEGSQKGQKRFRQI 44
++FY P + P TN T E+ W+S G SQ+ QK F +
Sbjct 801 KNFYLPLFISKFFEP--TNMTSEQFFTRWKSLGAASQEAQKIFNAL 844
Lambda K H
0.316 0.128 0.385
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 1164169380
Database: kyva
Posted date: Jul 3, 2009 9:03 AM
Number of letters in database: 47,500,486
Number of sequences in database: 112,920
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40