bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: kyva 112,920 sequences; 47,500,486 total letters Query= Eten_8040_orf1 Length=153 Score E Sequences producing significant alignments: (Bits) Value YJR062c 31.2 0.76 At1g17760 30.0 1.9 Hs7661954 28.9 3.9 Hs22050702 28.1 6.6 > YJR062c Length=457 Score = 31.2 bits (69), Expect = 0.76, Method: Compositional matrix adjust. Identities = 34/124 (27%), Positives = 49/124 (39%), Gaps = 30/124 (24%) Query 19 FSGSSLCKKHEKQLLDVEGTVCTEGWLAADIAEFLCITGGETLKWPSFLAGAD---TYLQ 75 F SS C + +VE +C WL + IT +TL S L A + Sbjct 202 FEFSSFCVDN-----NVELILCPMAWLNST-----SITDKQTLHNNSLLEAAKNKIAFAL 251 Query 76 PQRGVPVAQRAENGADNLTRSNPCGNTRQRRQKKPGDSEATNRNAADDTTSCSVSHDEPT 135 ++G+P+A ++ Q K GDS+ T R +DD+TS DEP Sbjct 252 KEQGLPLA-----------------GSQGIYQLKIGDSQRTPRVPSDDSTSEYKDMDEPD 294 Query 136 KREV 139 V Sbjct 295 MSNV 298 > At1g17760 Length=722 Score = 30.0 bits (66), Expect = 1.9, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 2/67 (2%) Query 79 GVPVAQRAENGADNLTRSNPCGNTRQRRQKKPGDSEATNRNAAD--DTTSCSVSHDEPTK 136 G V Q + ++++P G TR Q+ P D AT R +D + + +P Sbjct 622 GQTVKQSFAAKGNPPSQNDPSGPTRGVSQRLPRDRRATKRKDSDRQEEDDTATVQSQPLP 681 Query 137 REVFFLR 143 +VF LR Sbjct 682 TDVFRLR 688 > Hs7661954 Length=1401 Score = 28.9 bits (63), Expect = 3.9, Method: Composition-based stats. Identities = 22/83 (26%), Positives = 35/83 (42%), Gaps = 11/83 (13%) Query 75 QPQRGVPVAQRAENGADN---------LTRSNPCGNTRQRRQKKPGDSEATNRNAADDTT 125 +P G A +DN TR +P NT+QR KK ++ ++++ Sbjct 1318 KPSTGSRYQPLASTASDNDFVTPEPRRTTRRHP--NTQQRASKKKPKVVFSSDESSEEDL 1375 Query 126 SCSVSHDEPTKREVFFLRACLER 148 S ++ DE K+ LRA R Sbjct 1376 SAEMTEDETPKKTTPILRASARR 1398 > Hs22050702 Length=283 Score = 28.1 bits (61), Expect = 6.6, Method: Compositional matrix adjust. Identities = 29/94 (30%), Positives = 44/94 (46%), Gaps = 6/94 (6%) Query 64 PSFLAGADTYLQPQRGVPVAQRAENGADNLTRSNPCGNTRQ--RRQKKPGDS--EATNRN 119 P + T++Q RGV VA E G + +TR P + Q +RQ+ G S A+N + Sbjct 103 PQSVCAFYTHVQTVRGVAVAWETEAGFEPVTR-KPRIHEAQFIKRQRWNGSSFEMASNTD 161 Query 120 AADDTTSCSVSHDEPTKREVFFLRACLERGIEIP 153 D +C S+ P ++ L CL+ E P Sbjct 162 MRWDLEACK-SNCSPEPEDIDLLECCLQELREPP 194 Lambda K H 0.314 0.130 0.395 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1961355924 Database: kyva Posted date: Jul 3, 2009 9:03 AM Number of letters in database: 47,500,486 Number of sequences in database: 112,920 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40