bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.24+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: kyva
           112,920 sequences; 47,500,486 total letters



Query=  Eten_8008_orf1
Length=59
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  At3g07040                                                           27.7    5.5
  YMR041c                                                             27.7    6.0


> At3g07040
Length=926

 Score = 27.7 bits (60),  Expect = 5.5, Method: Compositional matrix adjust.
 Identities = 13/37 (35%), Positives = 23/37 (62%), Gaps = 3/37 (8%)

Query  21   HACSHSVRRKGTPDSQRPSTRNSMSVCMRTEQKMQVL  57
            H C   ++++ TPDS R +  +S+ VC   + KM++L
Sbjct  544  HLC---IQKEMTPDSIRATNLHSLLVCSSAKHKMELL  577


> YMR041c
Length=335

 Score = 27.7 bits (60),  Expect = 6.0, Method: Composition-based stats.
 Identities = 12/22 (54%), Positives = 14/22 (63%), Gaps = 0/22 (0%)

Query  7    LSLSLSLSPGLRQMHACSHSVR  28
            LS+SL  S   RQ H CSH +R
Sbjct  218  LSMSLLRSQETRQFHPCSHELR  239



Lambda     K      H
   0.318    0.125    0.357 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 1184950242


  Database: kyva
    Posted date:  Jul 3, 2009  9:03 AM
  Number of letters in database: 47,500,486
  Number of sequences in database:  112,920



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40