bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: kyva
112,920 sequences; 47,500,486 total letters
Query= Eten_8007_orf1
Length=189
Score E
Sequences producing significant alignments: (Bits) Value
Hs10047130 32.3 0.60
YNL138w 31.6 0.93
YOR191w 29.6 3.4
7303066 29.6 3.8
Hs22062566 29.3 4.4
Hs20070356 29.3 5.4
> Hs10047130
Length=586
Score = 32.3 bits (72), Expect = 0.60, Method: Composition-based stats.
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 0/38 (0%)
Query 50 FLHFKFSEQQQQQQQQHEGPLSLRSARLSSCCSCCGSS 87
LH F + + P S+RSA+LS C CC SS
Sbjct 396 LLHLFFCYSSSKSCWYNTWPKSVRSAQLSLSCQCCASS 433
> YNL138w
Length=526
Score = 31.6 bits (70), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 8/56 (14%)
Query 60 QQQQQQHEGPLSLRSARLSSCCSCCGSSSALHCGAVSRRRQPLRQQQQRPPRQQLV 115
+ QQ H+ P R SS S GS S G R ++P + +RPPR++LV
Sbjct 328 DKSQQTHKNP----ELRQSSTVSSTGSKS----GPPPRPKKPSTLKTKRPPRKELV 375
> YOR191w
Length=1619
Score = 29.6 bits (65), Expect = 3.4, Method: Composition-based stats.
Identities = 23/94 (24%), Positives = 37/94 (39%), Gaps = 16/94 (17%)
Query 30 APGDSVLPVSCLALSFSASPFLHFKFSEQQQQQQQQHEGPLSL----------------R 73
A G + +P S S+S L +Q Q QHE SL R
Sbjct 428 ASGSNSIPTSETDAQSSSSSVLQGTIMTEQATQSSQHECNSSLDTLKKNHQKLLKDLNSR 487
Query 74 SARLSSCCSCCGSSSALHCGAVSRRRQPLRQQQQ 107
+ L + SCC ++S + +SRR + + ++
Sbjct 488 ESELRNALSCCKTNSEILRRKLSRREKEVSDAEK 521
> 7303066
Length=577
Score = 29.6 bits (65), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 25/62 (40%), Gaps = 4/62 (6%)
Query 105 QQQRPPRQQLVKGAGKGAAAA----AAAAAAAAMALTKTSPWGRAPRLAWLAGSSLLLLL 160
QQRP G G GA + + + L+K PWG L G +LL+
Sbjct 401 DQQRPDNDTTEMGVGTGAGSGFTRRNSTRSGLHSDLSKYGPWGYLMLGMLLCGGALLICG 460
Query 161 LW 162
LW
Sbjct 461 LW 462
> Hs22062566
Length=1657
Score = 29.3 bits (64), Expect = 4.4, Method: Composition-based stats.
Identities = 14/26 (53%), Positives = 15/26 (57%), Gaps = 0/26 (0%)
Query 119 GKGAAAAAAAAAAAAMALTKTSPWGR 144
G G AAA A A + L KT PWGR
Sbjct 43 GAGRAAAQGEAEAPTLYLWKTGPWGR 68
> Hs20070356
Length=640
Score = 29.3 bits (64), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 0/54 (0%)
Query 122 AAAAAAAAAAAAMALTKTSPWGRAPRLAWLAGSSLLLLLLWGPSAAAAEGDLLQ 175
A A A A AM + +T+PW AP A ++ WG S+ AA L Q
Sbjct 366 AKPAHTALAPVAMPVRETNPWAHAPDAANKEIAATCSGTEWGQSSGAASPGLFQ 419
Lambda K H
0.317 0.126 0.374
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 3130490202
Database: kyva
Posted date: Jul 3, 2009 9:03 AM
Number of letters in database: 47,500,486
Number of sequences in database: 112,920
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40