bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: kyva
112,920 sequences; 47,500,486 total letters
Query= Eten_7907_orf2
Length=71
Score E
Sequences producing significant alignments: (Bits) Value
Hs20537729 30.4 0.77
SPBC4.04c 30.4 0.79
Hs14270487 29.3 1.7
Hs11128043 29.3 1.8
Hs18562615 28.5 3.3
CE18923 28.1 4.0
Hs14196448 27.3 7.2
Hs14196459 27.3 7.3
Hs11128041 26.9 8.2
Hs11056032 26.9 8.5
> Hs20537729
Length=672
Score = 30.4 bits (67), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 0/48 (0%)
Query 10 LEEEKRKREMAEMRARAAAEARVPVWPLTPEAAARLAASRQHAEEEAA 57
L E+ KR A+ ++ RVP WP +P++A + A R E+ A
Sbjct 475 LSPEQEKRSRAKHAGKSYVAVRVPFWPHSPKSAQAVFADRLAGREDPA 522
> SPBC4.04c
Length=830
Score = 30.4 bits (67), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 0/45 (0%)
Query 2 EVMARMQELEEEKRKREMAEMRARAAAEARVPVWPLTPEAAARLA 46
+V R+Q+++EEK R ++MR + A P+ E+A RL+
Sbjct 737 KVFPRLQQMDEEKISRLYSDMRRESLATGSYPITVRHLESAIRLS 781
> Hs14270487
Length=828
Score = 29.3 bits (64), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 0/46 (0%)
Query 17 REMAEMRARAAAEARVPVWPLTPEAAARLAASRQHAEEEAAASHRS 62
RE+AE R R + R ++ L P + + A R EE A S R
Sbjct 57 RELAERRVRIVSRGRTQLFSLNPRSGTLVTAGRIDREELCAQSPRC 102
> Hs11128043
Length=932
Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 0/45 (0%)
Query 17 REMAEMRARAAAEARVPVWPLTPEAAARLAASRQHAEEEAAASHR 61
RE+AE R R + R ++ L P + + A R EE A S R
Sbjct 57 RELAERRVRIVSRGRTQLFSLNPRSGTLVTAGRIDREELCAQSPR 101
> Hs18562615
Length=697
Score = 28.5 bits (62), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 12/70 (17%)
Query 4 MARMQELEEEKRKREM-------AEMRARAAAEARVPVWPLTPEAAARLAASRQHAEEEA 56
M ++Q EEE+ KREM + + + + PV PL P+ ++L H+ E +
Sbjct 451 MDKLQGEEEERLKREMLLAKLNEIDRELQDSRNLKYPVLPLLPDFESKL-----HSPERS 505
Query 57 AASHRSQHSA 66
++R S+
Sbjct 506 PKTYRFSESS 515
> CE18923
Length=1012
Score = 28.1 bits (61), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 17/23 (73%), Gaps = 0/23 (0%)
Query 1 DEVMARMQELEEEKRKREMAEMR 23
DEV ARM+EL EEK++ ++ R
Sbjct 774 DEVQARMKELTEEKKRSDVLLYR 796
> Hs14196448
Length=850
Score = 27.3 bits (59), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 0/45 (0%)
Query 17 REMAEMRARAAAEARVPVWPLTPEAAARLAASRQHAEEEAAASHR 61
RE+AE R + R ++ L P + + + A R EE A S R
Sbjct 61 RELAERGVRIVSRGRTQLFSLNPRSGSLITAGRIDREELCAQSAR 105
> Hs14196459
Length=823
Score = 27.3 bits (59), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 0/45 (0%)
Query 15 RKREMAEMRARAAAEARVPVWPLTPEAAARLAASRQHAEEEAAAS 59
+ +E+A+ R + R+P++ L P + + + A R EE A S
Sbjct 55 QPQELADGGVRIVSRGRMPLFALNPRSGSLITARRIDREELCAQS 99
> Hs11128041
Length=936
Score = 26.9 bits (58), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 0/45 (0%)
Query 17 REMAEMRARAAAEARVPVWPLTPEAAARLAASRQHAEEEAAASHR 61
RE+AE R + R ++ L P + + + A R EE A S R
Sbjct 61 RELAERGVRIVSRGRTQLFSLNPRSGSLITAGRIDREELCAQSAR 105
> Hs11056032
Length=931
Score = 26.9 bits (58), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 0/45 (0%)
Query 15 RKREMAEMRARAAAEARVPVWPLTPEAAARLAASRQHAEEEAAAS 59
+ +E+A+ R + R+P++ L P + + + A R EE A S
Sbjct 55 QPQELADGGVRIVSRGRMPLFALNPRSGSLITARRIDREELCAQS 99
Lambda K H
0.308 0.114 0.304
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 1194057928
Database: kyva
Posted date: Jul 3, 2009 9:03 AM
Number of letters in database: 47,500,486
Number of sequences in database: 112,920
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40