bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: kyva
112,920 sequences; 47,500,486 total letters
Query= Eten_7684_orf1
Length=165
Score E
Sequences producing significant alignments: (Bits) Value
7298695 37.4 0.014
At5g04610 31.6 0.72
At2g31740 31.6 0.82
YDR270w 31.2 1.0
7292091 29.6 3.1
Hs18568537 29.3 3.6
At4g23520 28.9 4.4
> 7298695
Length=673
Score = 37.4 bits (85), Expect = 0.014, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 0/46 (0%)
Query 92 PSKLNNKTAAVLVPPGQELAWTFVTEEGNQQVAEQLDVGRLLVVTF 137
P++ K AA +VP G+E+ W F T G +++ + + RL VVT
Sbjct 291 PARGLGKYAAFIVPQGREVEWIFSTPAGRKKLQDSANFQRLAVVTL 336
> At5g04610
Length=444
Score = 31.6 bits (70), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query 98 KTAAVLVPPGQELAWTFVTEEGNQQVAEQL-DVGRLLVV 135
+ AA+LVP +E W F TE G Q+ + ++ RL+++
Sbjct 59 RVAAILVPKHRESDWIFSTESGQLQLLLNMPEISRLILI 97
> At2g31740
Length=690
Score = 31.6 bits (70), Expect = 0.82, Method: Composition-based stats.
Identities = 23/81 (28%), Positives = 31/81 (38%), Gaps = 4/81 (4%)
Query 55 LARSQNPRRVSVQVGGLGLFSVCTVVVYDNLNPNSSKPSKLNNKTAAVLVPPGQELAWTF 114
LA RR+ +GG G V+ D + LVP + W F
Sbjct 249 LAELTEGRRIKFTLGGQGSNFSYRAVLLDA----QKQTEPFVYYCGVFLVPKTRAHEWLF 304
Query 115 VTEEGNQQVAEQLDVGRLLVV 135
+EEG QV E RL++V
Sbjct 305 CSEEGQWQVVESSQAARLIMV 325
> YDR270w
Length=1004
Score = 31.2 bits (69), Expect = 1.0, Method: Composition-based stats.
Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 6/92 (6%)
Query 52 LQTLARSQNPRRVS--VQVGGLGLFSVCTVVVYDNLNPNSSKPSKLNNKTAAVLVPPGQE 109
L+TLA+SQ +S +Q+ SVC+++ N P +L V + PG +
Sbjct 389 LETLAKSQTSTALSKLIQLTP----SVCSIISDVERNETKEIPIELLQVNDIVEIKPGMK 444
Query 110 LAWTFVTEEGNQQVAEQLDVGRLLVVTFPLGF 141
+ + G ++ E L G ++V GF
Sbjct 445 IPADGIITRGESEIDESLMTGESILVPKKTGF 476
> 7292091
Length=866
Score = 29.6 bits (65), Expect = 3.1, Method: Composition-based stats.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query 100 AAVLVPPGQELAWTFVTEEGNQQVAEQLDVGRLLVVTFPLGFEESVGEDK-KEIKE 154
A + P G+++AW F +E N+Q+ E+ G LL E E++ KE++E
Sbjct 769 AVAINPKGRDMAWEFF-KENNKQLLERYQGGFLLSRLIKYLIENFASEERAKEVEE 823
> Hs18568537
Length=552
Score = 29.3 bits (64), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Query 98 KTAAVLVPPGQELAWTFVTEEGNQQVAEQLDV-GRLLVVTFPLGFEESVGEDK 149
+T+A++ PGQ+ V +E Q + + GR +++TF +GF G +K
Sbjct 45 RTSAIV--PGQQRLIMRVAQEQTQNANSDVSLHGRWVIITFHMGFFRGTGRNK 95
> At4g23520
Length=355
Score = 28.9 bits (63), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Query 59 QNPRRVSVQVGGLGLFSVCTVVVYDNLNPNSSKPSKLNNKTAAVLVP 105
N + +S Q+G L F+ TV Y +L P S KP + N KT+ VP
Sbjct 82 HNAKNLSYQLG-LTRFADLTVQEYRDLFPGSPKPKQRNLKTSRRYVP 127
Lambda K H
0.312 0.130 0.379
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 2353551590
Database: kyva
Posted date: Jul 3, 2009 9:03 AM
Number of letters in database: 47,500,486
Number of sequences in database: 112,920
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40