bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: kyva
112,920 sequences; 47,500,486 total letters
Query= Eten_7487_orf4
Length=114
Score E
Sequences producing significant alignments: (Bits) Value
CE23837 29.3 1.7
CE23836 29.3 1.7
Hs4505799 28.9 2.2
Hs4826710 28.9 2.4
At1g53680 28.1 4.4
Hs21328446 26.9 9.7
HsM4885451 26.9 10.0
> CE23837
Length=283
Score = 29.3 bits (64), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/104 (23%), Positives = 43/104 (41%), Gaps = 9/104 (8%)
Query 15 GSGRKEEREKANKDFLFSFSFSFCCGCINCLFILSICCFPCLFVAAAA---------AAA 65
SG + ++ K ++ +LF+F+++ C N +ICC+ LF + A
Sbjct 95 NSGLESDKAKFHELYLFAFNYAKSAACRNLDLETAICCWDVLFGQRSTIMTQWIDFLWAQ 154
Query 66 AAAAAAAAAADIAITAAFASAAAVAAAPAAVLLLQVPLLPLPLL 109
AAA+ A ++ + A + + L LL P L
Sbjct 155 ENAAASRLAQNVGASNAKQFKSVWISRDTWNLFWDFILLSKPDL 198
> CE23836
Length=336
Score = 29.3 bits (64), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 25/43 (58%), Gaps = 0/43 (0%)
Query 15 GSGRKEEREKANKDFLFSFSFSFCCGCINCLFILSICCFPCLF 57
SG + ++ K ++ +LF+F+++ C N +ICC+ LF
Sbjct 148 NSGLESDKAKFHELYLFAFNYAKSAACRNLDLETAICCWDVLF 190
> Hs4505799
Length=1686
Score = 28.9 bits (63), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 21/33 (63%), Gaps = 5/33 (15%)
Query 19 KEEREKANKDFLFSFSFSFCCGCINCLFILSIC 51
+EE EKA+++F++S C GC ++L IC
Sbjct 1222 EEEYEKASENFIYS-----CAGCCVATYVLGIC 1249
> Hs4826710
Length=1396
Score = 28.9 bits (63), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 10/31 (32%), Positives = 17/31 (54%), Gaps = 0/31 (0%)
Query 8 QLNSKAWGSGRKEEREKANKDFLFSFSFSFC 38
+ S W EE+++ +++FL F F FC
Sbjct 399 EYKSDQWKPPNLEEKKRYDREFLLGFQFIFC 429
> At1g53680
Length=224
Score = 28.1 bits (61), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 15/21 (71%), Gaps = 0/21 (0%)
Query 12 KAWGSGRKEEREKANKDFLFS 32
K WG+ + EE+EK K+FL S
Sbjct 116 KIWGNKKGEEQEKGKKEFLES 136
> Hs21328446
Length=1076
Score = 26.9 bits (58), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 37/81 (45%), Gaps = 6/81 (7%)
Query 35 FSFCCGCINCLFILSICCFPCLFVAAAAA-----AAAAAAAAAAAADIAITAAF-ASAAA 88
F++C +C + S CL +A A AAA I AA+ A+
Sbjct 700 FAYCWAIKHCALLGSTGERICLAGDSAGGNLCFTVALRAAAYGVRVPDGIMAAYPATMLQ 759
Query 89 VAAAPAAVLLLQVPLLPLPLL 109
AA+P+ +L L PLLPL +L
Sbjct 760 PAASPSRLLSLMDPLLPLSVL 780
> HsM4885451
Length=1076
Score = 26.9 bits (58), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 6/81 (7%)
Query 35 FSFCCGCINCLFILSICCFPCLFVAAAAA------AAAAAAAAAAAADIAITAAFASAAA 88
F++C +C + S CL +A A AAA D + A A+
Sbjct 700 FAYCWAIKHCALLGSTGERICLAGDSAGGNLCFTVALRAAAYGVRVPDGIMAAYPATMLQ 759
Query 89 VAAAPAAVLLLQVPLLPLPLL 109
AA+P+ +L L PLLPL +L
Sbjct 760 PAASPSRLLSLMDPLLPLSVL 780
Lambda K H
0.329 0.135 0.411
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 1181971906
Database: kyva
Posted date: Jul 3, 2009 9:03 AM
Number of letters in database: 47,500,486
Number of sequences in database: 112,920
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40