bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: kyva
112,920 sequences; 47,500,486 total letters
Query= Eten_7219_orf5
Length=86
Score E
Sequences producing significant alignments: (Bits) Value
Hs22027646 32.7 0.16
7297667 31.6 0.40
Hs18577996 30.8 0.59
Hs7657238 30.0 1.0
Hs18584611 28.9 2.2
Hs7304919 28.9 2.4
Hs18555928 28.1 4.5
Hs22043058 27.7 5.7
Hs18560325 27.3 7.9
Hs18702327 26.9 9.3
> Hs22027646
Length=956
Score = 32.7 bits (73), Expect = 0.16, Method: Composition-based stats.
Identities = 21/47 (44%), Positives = 27/47 (57%), Gaps = 6/47 (12%)
Query 4 RRGARRGPGESGAARG--AGGGSVPARPRGKLRDPRAAGAPRGPQRP 48
R GA++ SG +G GGG PA+P GK+ DPR G P P+ P
Sbjct 272 RNGAKQHLPGSGNGKGFKVGGGPSPAQPAGKVLDPR--GPP--PEYP 314
> 7297667
Length=572
Score = 31.6 bits (70), Expect = 0.40, Method: Composition-based stats.
Identities = 15/56 (26%), Positives = 26/56 (46%), Gaps = 0/56 (0%)
Query 24 SVPARPRGKLRDPRAAGAPRGPQRPAGRRGAPGGSLFGGDAVLANDDGVVAVVGLE 79
+ P+ P+G L R + PR G P G +G D +++ +G + + LE
Sbjct 353 ATPSSPQGDLAQIRYSSLPRSTMSEPLGYGMPNGHFYGHDHGMSDANGGIQISSLE 408
> Hs18577996
Length=421
Score = 30.8 bits (68), Expect = 0.59, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Query 8 RRGPGESGAARGAGGGSVPARPRGKLRDPRAAGAPRGPQRPAGRRGAPGGSLFGG 62
RR PG++ A+ S+ RPRG ++ R+ G+ + PQ+ G+ G PG + G
Sbjct 79 RRSPGKARASLSQRSESLSRRPRG-IQTARSPGSDKSPQKLGGQLG-PGTARLPG 131
> Hs7657238
Length=1065
Score = 30.0 bits (66), Expect = 1.0, Method: Composition-based stats.
Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Query 25 VPAR-PRGKLRDPRAAGAPRGPQRPAGRRGAPGGSLFGG 62
VP+R R + P A +GP+ P RG+PGGSL G
Sbjct 632 VPSRQSRAPSKQPPAGNVAQGPE-PRDSRGSPGGSLGGA 669
> Hs18584611
Length=566
Score = 28.9 bits (63), Expect = 2.2, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 24/59 (40%), Gaps = 2/59 (3%)
Query 1 AKPRRGARRGPGESGAARGAGGGSVPARPRGKLRDPRAAGAPRGPQRPAGRRGAPGGSL 59
+ PRR ++ A G G PA P D + G PQ P RRG PG L
Sbjct 45 SDPRRSIVECQPDASATPGVGTADSPAAPTDSRDDQK--GLSLSPQSPPERRGYPGPGL 101
> Hs7304919
Length=1674
Score = 28.9 bits (63), Expect = 2.4, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 24/55 (43%), Gaps = 10/55 (18%)
Query 3 PRRGARRGPGESGAARGAGGGSVPARPRGKLRDPRAAGAPRGPQR--PAGRRGAP 55
PR RRG G GG PAR R AA GP+R P GRR +P
Sbjct 68 PRSSERRGSG--------GGTQFPARSRAVAAGEAAARGAAGPERGSPLGRRVSP 114
> Hs18555928
Length=578
Score = 28.1 bits (61), Expect = 4.5, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 0/55 (0%)
Query 9 RGPGESGAARGAGGGSVPARPRGKLRDPRAAGAPRGPQRPAGRRGAPGGSLFGGD 63
RG S G G V + P G+ + P + PRG A + +P G GG+
Sbjct 194 RGDHASLENEKPGTGDVCSAPAGRNQSPEPSSGPRGEVPLAKQPSSPSGEGDGGE 248
> Hs22043058
Length=3631
Score = 27.7 bits (60), Expect = 5.7, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Query 27 ARPRGKLRDPRAAGAPRGPQRPAGRRGAPGGSLFGGDAVLANDDG 71
A PRG + G RGPQ G RG PG + F G + D G
Sbjct 232 AGPRGVKGEIGDVGE-RGPQSRQGPRGQPGNAGFPGFVGTSGDQG 275
> Hs18560325
Length=1343
Score = 27.3 bits (59), Expect = 7.9, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 26/58 (44%), Gaps = 4/58 (6%)
Query 1 AKPRRGARRGPGESGAARGAGGGSVPAR---PR-GKLRDPRAAGAPRGPQRPAGRRGA 54
+ RR A PGE G A A G AR PR G R R +G P + G RGA
Sbjct 1262 GRRRRAALTEPGERGQAAPAESGPRGARSSSPRPGPKRKERPSGDPGESETGKGPRGA 1319
> Hs18702327
Length=605
Score = 26.9 bits (58), Expect = 9.3, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 17/36 (47%), Gaps = 0/36 (0%)
Query 10 GPGESGAARGAGGGSVPARPRGKLRDPRAAGAPRGP 45
G E GAAR AGG +V G D AGA P
Sbjct 256 GAAEGGAARTAGGMAVAGTATGPRTDVAIAGAAMSP 291
Lambda K H
0.320 0.144 0.449
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 1190857334
Database: kyva
Posted date: Jul 3, 2009 9:03 AM
Number of letters in database: 47,500,486
Number of sequences in database: 112,920
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40