bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.24+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: kyva
           112,920 sequences; 47,500,486 total letters



Query=  Eten_7184_orf2
Length=58
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  CE20203                                                             29.3    1.8
  CE28747                                                             28.1    4.3


> CE20203
Length=343

 Score = 29.3 bits (64),  Expect = 1.8, Method: Composition-based stats.
 Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 1/40 (2%)

Query  2    RPFTGVLIDPLFLQSCWPSRAPEGLLGLQDTGSPELLLLP  41
            RP T V+I PL L  C+P+   +GL   +D    E ++ P
Sbjct  113  RPCTQVMILPLNLH-CFPNTLKKGLFATRDILEGEFIIAP  151


> CE28747
Length=1158

 Score = 28.1 bits (61),  Expect = 4.3, Method: Composition-based stats.
 Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 4/52 (7%)

Query  4     FTGVLIDPLFLQSCWPSRAPEGLLGLQDTG---SPELLLLPTWLCCCCCSIG  52
             F G+  +P+F    W +     +L +Q  G   S   L L  W+ C CC +G
Sbjct  962   FKGIFTNPIFC-VIWITTLISHILIVQFGGQWFSTAPLDLTQWIICICCGVG  1012



Lambda     K      H
   0.326    0.146    0.535 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 1187999082


  Database: kyva
    Posted date:  Jul 3, 2009  9:03 AM
  Number of letters in database: 47,500,486
  Number of sequences in database:  112,920



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40