bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: kyva
112,920 sequences; 47,500,486 total letters
Query= Eten_7005_orf2
Length=136
Score E
Sequences producing significant alignments: (Bits) Value
YBR275c 29.3 2.5
Hs4507829 28.9 2.6
Hs4504951 28.9 2.6
At3g12590 28.9 2.7
At1g16710 28.9 2.7
7298709 28.5 3.6
At2g05930 28.1 5.2
At2g45900 27.7 7.2
At4g32970 27.3 8.8
> YBR275c
Length=1916
Score = 29.3 bits (64), Expect = 2.5, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Query 32 RAAVYEQQQQLFRCGYALAELRYL---QQQHAAADLAALVSDKRQKAALLDFETSLESLK 88
RA+ + +LF+C L +R+L QQ + + + Q A+ + E S E ++
Sbjct 1009 RASYFAANIKLFKCSEQLTLVRWLLKGQQLEQLNQNFSEIENVLQNASDSELEKS-EIIR 1067
Query 89 EATHLARKAAAKPQKAGLFH 108
E HLA +P +GL +
Sbjct 1068 ELLHLAMANPIEPLFSGLLN 1087
> Hs4507829
Length=302
Score = 28.9 bits (63), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 34/94 (36%), Gaps = 1/94 (1%)
Query 19 KVGEVASKIAGAGRAAVYEQQQQLFRCGYALAELRYLQQQHAAADLAALVSDKRQKAALL 78
K G+ S G G A E ++++ RC + Y + H A +K K +
Sbjct 195 KSGQSDSDQGGLGAEACPENKKRVHRCQFNGCRKVYTKSSHLKAHQRTHTGEKPYKCSWE 254
Query 79 DFETSLESLKEAT-HLARKAAAKPQKAGLFHRNF 111
E E T H + AKP K R F
Sbjct 255 GCEWRFARSDELTRHYRKHTGAKPFKCNHCDRCF 288
> Hs4504951
Length=1786
Score = 28.9 bits (63), Expect = 2.6, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
Query 58 QHAAADLAA----LVSDKRQKAALLDFETSLESLKEATHLARKAAAKPQKA 104
QH+AAD+A L KR + D + + + +KEA A KA +KA
Sbjct 1562 QHSAADIARAEMLLEEAKRASKSATDVKVTADMVKEALEEAEKAQVAAEKA 1612
> At3g12590
Length=1211
Score = 28.9 bits (63), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 9/38 (23%), Positives = 23/38 (60%), Gaps = 0/38 (0%)
Query 11 GFPWIRELKVGEVASKIAGAGRAAVYEQQQQLFRCGYA 48
G+ W+ +L + E++ + G+ ++ + QQ++ CG +
Sbjct 809 GYIWLGDLLIAEISEESGGSIWLSIKDLQQKIAHCGTS 846
> At1g16710
Length=1706
Score = 28.9 bits (63), Expect = 2.7, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 0/43 (0%)
Query 34 AVYEQQQQLFRCGYALAELRYLQQQHAAADLAALVSDKRQKAA 76
A E + + RCG LR LQQQ + AA++ RQ+AA
Sbjct 1657 ACKESECDVPRCGDLKEHLRRLQQQSDSRRRAAVMEMMRQRAA 1699
> 7298709
Length=674
Score = 28.5 bits (62), Expect = 3.6, Method: Composition-based stats.
Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Query 63 DLAALVSDKRQKAALLDFETSLESLKEATHLARKAAAKPQKAGLFHRNFLLLLPFPPDKQ 122
D+ +++ R KA D ET+++SL E + +AG L F ++
Sbjct 429 DVVYVINSGRTKATNYDIETNIQSLDEVWVTKANTQQRRGRAGRVRPGICYNL-FSRARE 487
Query 123 READDLPPPE 132
DD+P PE
Sbjct 488 DRMDDIPTPE 497
> At2g05930
Length=916
Score = 28.1 bits (61), Expect = 5.2, Method: Composition-based stats.
Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 11/84 (13%)
Query 14 WIRE-LKVGEVASKIAGAGRAAVYEQQQQLFRCGYALAELRYLQQQHAAADLAALVSDKR 72
W+ E LKV E+ K+ G AA + + +C A + R L Q+ +SD R
Sbjct 353 WLEEKLKVQELTEKLKGELTAANQKNSELTQKCSVAEEKNRELSQE---------LSDTR 403
Query 73 QKAALLDFETS-LESLKEATHLAR 95
+K +L+ T L+S+ A + +
Sbjct 404 KKIHMLNSGTKDLDSILAAGRVGK 427
> At2g45900
Length=720
Score = 27.7 bits (60), Expect = 7.2, Method: Composition-based stats.
Identities = 31/129 (24%), Positives = 50/129 (38%), Gaps = 13/129 (10%)
Query 21 GEVASKIAGAGRAAV------YEQQQQLFRCGYALAELRYLQQQHAAADLAALVSDKR-- 72
GE+ IA G A E+ + CG +A ++L + A D+ A + DK
Sbjct 298 GEILPDIASKGEANKEDTFHESEKDSKKSMCGIYIAAKKHLSEMLAEGDIDADLPDKEVP 357
Query 73 ----QKAALLDFETSLESLKEATHLARKAAAKPQKAGLFHRNFLL-LLPFPPDKQREADD 127
+ AL +F T S + L + KP +++ L + E +
Sbjct 358 RILGKILALPEFFTPENSPRVTLALDHQIIEKPNIQQCSSKDYYYEPLRLDSNNHEETEF 417
Query 128 LPPPEDDEM 136
+P PED M
Sbjct 418 MPVPEDTRM 426
> At4g32970
Length=743
Score = 27.3 bits (59), Expect = 8.8, Method: Composition-based stats.
Identities = 13/42 (30%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query 88 KEATHLARKAAAKPQKAGLFHRNFLLLLPFPPDKQREADDLP 129
+EA+ + +K AK +K ++ +L PFPP+ +++ D++P
Sbjct 320 EEASTMPQKKKAKTRKEQSTNKQSKMLSPFPPNVKKD-DEVP 360
Lambda K H
0.321 0.135 0.391
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 1425342594
Database: kyva
Posted date: Jul 3, 2009 9:03 AM
Number of letters in database: 47,500,486
Number of sequences in database: 112,920
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40