bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: kyva
112,920 sequences; 47,500,486 total letters
Query= Eten_7005_orf1
Length=131
Score E
Sequences producing significant alignments: (Bits) Value
At5g05970 32.3 0.25
CE21285 31.2 0.60
Hs4885551 30.8 0.75
Hs20481179 30.0 1.1
At5g09650 28.5 3.3
Hs13129064 28.1 4.2
CE00169 28.1 4.3
7301301 28.1 4.4
CE09109 27.7 6.4
Hs17402863 27.3 7.8
CE23212 27.3 8.4
YPL173w 26.9 9.6
> At5g05970
Length=787
Score = 32.3 bits (72), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 0/44 (0%)
Query 17 STSSSSSCFAAATPSPSCATCSSSTLQQTLLLSSPTKDKKLLFW 60
S S C + TPSP CA S L+++S +DKK+ W
Sbjct 27 SADSGDPCVLSYTPSPGCAVNSVKWNHTNLVVASTGEDKKISLW 70
> CE21285
Length=454
Score = 31.2 bits (69), Expect = 0.60, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Query 66 LNPSKRPLIWPERQQQNRRKRGCFTATFCCCCRFPRTSSARPTTSRPPKTTRCELIDQL 124
+N RPL+ P+++QQN +KR T C CR T+ R P C L +L
Sbjct 285 MNHHARPLVKPKKRQQNAQKR---TGIECVNCRTNTTTLWRRNGEGHPVCNACGLYFKL 340
> Hs4885551
Length=389
Score = 30.8 bits (68), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 0/34 (0%)
Query 72 PLIWPERQQQNRRKRGCFTATFCCCCRFPRTSSA 105
P+ E Q+ ++KR CF FC C+FP S A
Sbjct 316 PVHHKEFQRNIKKKRACFPFAFCRDCQFPEASPA 349
> Hs20481179
Length=132
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 3/53 (5%)
Query 54 DKKLLFWTSKLLLNPSKRPLIWPERQQQNRRKRGCFTATFCCCCRFPRTSSAR 106
++ LL WT + L +K L+ E GCFT T CC P +S +
Sbjct 46 ERGLLHWTFSVFLFNTKNKLLLEESSDAKISFPGCFTNT---CCGHPLGNSGK 95
> At5g09650
Length=300
Score = 28.5 bits (62), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 19/85 (22%), Positives = 28/85 (32%), Gaps = 6/85 (7%)
Query 5 WHRRSRVPDVLQSTSSSSSCFAAATPSPSCATCSSSTLQQTLLLSSPTKDKKLLFWTSKL 64
WH D+ + F P S A +T + + TK KL ++ +
Sbjct 93 WH------DIPLTLGDGVFNFIVEIPKESKAKMEVATDEDFTPIKQDTKKGKLRYYPYNI 146
Query 65 LLNPSKRPLIWPERQQQNRRKRGCF 89
N P W + N GCF
Sbjct 147 NWNYGLLPQTWEDPSHANSEVEGCF 171
> Hs13129064
Length=234
Score = 28.1 bits (61), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Query 46 LLLSSPTKDKKLLFWTSKLL-LNPSKRPLI-WPERQQQNRRKRGC 88
LLL KD LL+ ++ L P R L W + Q+Q RR R C
Sbjct 122 LLLPDDFKDFSLLYEEARYYQLQPMVRELERWQQEQEQRRRSRAC 166
> CE00169
Length=529
Score = 28.1 bits (61), Expect = 4.3, Method: Composition-based stats.
Identities = 18/41 (43%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Query 2 SVRWHRRSRVPDVLQSTSSSS--SCFAAATPSPSCATCSSS 40
SVR R R P +ST+ + S F A TP PS A+ SS+
Sbjct 96 SVRTDRSFRTPITTRSTTEAPDVSSFDADTPGPSSASTSSA 136
> 7301301
Length=2659
Score = 28.1 bits (61), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Query 61 TSKLLLNPSKRPLIWP-ERQQQNRRKRGC 88
T KL+ N K PLI R QQ+R RG
Sbjct 740 TQKLIKNDDKHPLIAAMHRHQQDRNSRGI 768
> CE09109
Length=434
Score = 27.7 bits (60), Expect = 6.4, Method: Composition-based stats.
Identities = 12/24 (50%), Positives = 16/24 (66%), Gaps = 0/24 (0%)
Query 12 PDVLQSTSSSSSCFAAATPSPSCA 35
P V Q+T S SC+ AAT +PS +
Sbjct 35 PAVPQNTLSRKSCYGAATSAPSSS 58
> Hs17402863
Length=715
Score = 27.3 bits (59), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 0/49 (0%)
Query 2 SVRWHRRSRVPDVLQSTSSSSSCFAAATPSPSCATCSSSTLQQTLLLSS 50
SV + R V+Q SS A +P SC S+ L+ LLL S
Sbjct 70 SVSYLRVKSFFQVVQEQSSRQPAAGAPSPGDSCPLAGSAVLEGRLLLES 118
> CE23212
Length=1651
Score = 27.3 bits (59), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 0/29 (0%)
Query 45 TLLLSSPTKDKKLLFWTSKLLLNPSKRPL 73
TLL SSP K LL +LL++ S +PL
Sbjct 1151 TLLTSSPNTQKNLLDMIGRLLVDISTKPL 1179
> YPL173w
Length=297
Score = 26.9 bits (58), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 0/48 (0%)
Query 44 QTLLLSSPTKDKKLLFWTSKLLLNPSKRPLIWPERQQQNRRKRGCFTA 91
QT L + P ++ FW ++ NP + I R ++ KRG TA
Sbjct 193 QTNLATDPVIAREQTFWVDSVVRNPIPKKAIPSIRNPHSKYKRGTLTA 240
Lambda K H
0.321 0.128 0.410
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 1283105810
Database: kyva
Posted date: Jul 3, 2009 9:03 AM
Number of letters in database: 47,500,486
Number of sequences in database: 112,920
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40