bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: kyva 112,920 sequences; 47,500,486 total letters Query= Eten_6634_orf3 Length=105 Score E Sequences producing significant alignments: (Bits) Value YMR172w 32.3 0.19 Hs17441881 31.6 0.33 HsM11545825 30.8 0.67 Hs21735569 30.8 0.70 CE00147 29.6 1.4 Hs18583609 29.6 1.5 7291245 27.7 5.4 Hs17442101 27.7 5.7 > YMR172w Length=719 Score = 32.3 bits (72), Expect = 0.19, Method: Composition-based stats. Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 13/68 (19%) Query 9 RHASICRRRGSLHSKLDNSCSG-------AATEPEATSE------PAATQEMALYPGAAT 55 ++ASI +RR SLH K NS +G +AT+P S+ A T ++ T Sbjct 576 KNASINKRRRSLHHKKSNSLNGRRKLHGESATKPNINSDLHYRILKAPTDVKTIWEEYDT 635 Query 56 ATRGRPCV 63 RG+P + Sbjct 636 GIRGKPSI 643 > Hs17441881 Length=394 Score = 31.6 bits (70), Expect = 0.33, Method: Compositional matrix adjust. Identities = 26/94 (27%), Positives = 36/94 (38%), Gaps = 8/94 (8%) Query 18 GSLHSKLDNSCSGAATEPEATSEPAATQEMALYP-GAATATRGRPCVGARRQQQQREQRQ 76 G L LD+ G E EP T+ A YP G G+R +Q++ E R Sbjct 249 GPLVRILDSGDLGLFDEYSGQGEPDQTEAPACYPRGHEVVNSSLDSAGSRTKQEETEGRL 308 Query 77 NFCCPCPQRQSLLRFA-------ALCVVCILCFC 103 C P R + L F ++CV I+ Sbjct 309 VSCWPVATRLTELEFKPMYGEPNSVCVWPIMLLV 342 > HsM11545825 Length=1332 Score = 30.8 bits (68), Expect = 0.67, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 1/70 (1%) Query 21 HSKLDNSCSGAATEPEATSEPAATQEMALYPGAATATRGRPCVGARRQQQQREQRQNFCC 80 HSK +GA E E + P ++E + G+ + R + V + Q +Q+Q+ Sbjct 361 HSKGSEQTTGAENEVETNALPVVSKETQIITGSDESCR-KDLVKNEELEIQEKQKQSDIR 419 Query 81 PCPQRQSLLR 90 P P S+L+ Sbjct 420 PSPGDSSVLQ 429 > Hs21735569 Length=1339 Score = 30.8 bits (68), Expect = 0.70, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 1/70 (1%) Query 21 HSKLDNSCSGAATEPEATSEPAATQEMALYPGAATATRGRPCVGARRQQQQREQRQNFCC 80 HSK +GA E E + P ++E + G+ + R + V + Q +Q+Q+ Sbjct 361 HSKGSEQTTGAENEVETNALPVVSKETQIITGSDESCR-KDLVKNEELEIQEKQKQSDIR 419 Query 81 PCPQRQSLLR 90 P P S+L+ Sbjct 420 PSPGDSSVLQ 429 > CE00147 Length=405 Score = 29.6 bits (65), Expect = 1.4, Method: Composition-based stats. Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 0/37 (0%) Query 31 AATEPEATSEPAATQEMALYPGAATATRGRPCVGARR 67 + T P AT+ A+ + ++ PG + +T G P VG R+ Sbjct 179 SKTPPIATTRFASLRHLSSAPGTSASTSGSPSVGIRK 215 > Hs18583609 Length=565 Score = 29.6 bits (65), Expect = 1.5, Method: Compositional matrix adjust. Identities = 22/86 (25%), Positives = 38/86 (44%), Gaps = 12/86 (13%) Query 8 TRHASICRRRGSLHSKLDNSCSGAATEPEATSEPAATQEMALYPGAATATRGRPCVGARR 67 TR+ + +GS + L+N+ + P+ + P T E+A +G G R+ Sbjct 34 TRNPELGEEKGSSQAYLENAAFKGCSAPKKSMPPTTTLEVA----KERDEQGDSPKGWRQ 89 Query 68 QQQQ--------REQRQNFCCPCPQR 85 ++Q+ R+Q QNF PQ Sbjct 90 ERQRNMYPGVSLRDQDQNFISDSPQN 115 > 7291245 Length=870 Score = 27.7 bits (60), Expect = 5.4, Method: Compositional matrix adjust. Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%) Query 72 REQRQNFCCPCPQRQSLLRFAALCVVCILCFCRS 105 RE+ + PQR +LL F +CV CI+C+ S Sbjct 19 REREREGATNSPQR-NLLEFLCICVACIVCYYNS 51 > Hs17442101 Length=425 Score = 27.7 bits (60), Expect = 5.7, Method: Compositional matrix adjust. Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 8/70 (11%) Query 17 RGSLHSKLDNSCSGAATEPEATSEPAATQEMAL----YPGAATATRGRPCVGARRQQQQR 72 R SLHS L S + + E EAT ++ EM + Y + +RG+ +RRQ Sbjct 67 RASLHSTLGLSWNNSMKEAEATLLQGSSFEMQVLCGKYIDKKSLSRGK----SRRQWFHV 122 Query 73 EQRQNFCCPC 82 E + C C Sbjct 123 ELGKRLTCVC 132 Lambda K H 0.324 0.131 0.426 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1170944580 Database: kyva Posted date: Jul 3, 2009 9:03 AM Number of letters in database: 47,500,486 Number of sequences in database: 112,920 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40