bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: kyva
112,920 sequences; 47,500,486 total letters
Query= Eten_6634_orf1
Length=102
Score E
Sequences producing significant alignments: (Bits) Value
At4g08580 34.7 0.046
At5g17900 33.9 0.067
At5g39060 31.6 0.33
At5g54730 31.2 0.47
7296855 29.6 1.5
Hs18562225 29.3 1.9
7295685 29.3 2.0
At4g20320 28.5 2.8
Hs20537937 28.5 3.4
CE04882 28.5 3.6
At5g52910 28.1 3.7
Hs15741230 27.3 7.0
> At4g08580
Length=435
Score = 34.7 bits (78), Expect = 0.046, Method: Composition-based stats.
Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 7/58 (12%)
Query 27 QEQQQSQKQPQSQQPRRKWRFIQGQRQQHGG-----DPASVPGGSSNNGSKGKTFAAP 79
++ ++ +P S QP++KW F+ Q+ H G DP G + +G + F+AP
Sbjct 302 RDWERKNPKPSSAQPKKKWNFM--QKYYHKGAFFQADPDDEAGSAGTDGIFQRDFSAP 357
> At5g17900
Length=435
Score = 33.9 bits (76), Expect = 0.067, Method: Composition-based stats.
Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 7/58 (12%)
Query 27 QEQQQSQKQPQSQQPRRKWRFIQGQRQQHGG-----DPASVPGGSSNNGSKGKTFAAP 79
++ ++ +P S QP++KW F+ Q+ H G DP G + +G + F+AP
Sbjct 302 RDWERKNPKPLSAQPKKKWNFM--QKYYHKGAFFQADPDDEAGSAGTDGIFQRDFSAP 357
> At5g39060
Length=543
Score = 31.6 bits (70), Expect = 0.33, Method: Composition-based stats.
Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 0/47 (0%)
Query 10 PSAAAGAACTASWTTHAQEQQQSQKQPQSQQPRRKWRFIQGQRQQHG 56
P+ CT +W Q++ K ++Q P RF G++Q HG
Sbjct 492 PTNVQALLCTRNWFRGFQDKLMRSKVKRTQTPPLHERFKTGKKQVHG 538
> At5g54730
Length=763
Score = 31.2 bits (69), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Query 19 TASWTTHAQEQQQSQKQPQSQQPRRKWRFIQGQRQQHGGDPAS-VPGGSSNNGSKGKTFA 77
TA+ T E + + P R+W IQ Q ++ DP S + GG ++ SK K F
Sbjct 535 TAAMTGFDSESGLETEGKLAVDPIRRWSMIQNQSRRETHDPHSDIYGGGTSVDSKSKVFP 594
Query 78 APV 80
V
Sbjct 595 EVV 597
> 7296855
Length=545
Score = 29.6 bits (65), Expect = 1.5, Method: Composition-based stats.
Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Query 23 TTHAQEQQQSQKQPQSQQPRRKWRFIQGQRQ--QHGGDPASVPGGSSNNGSK 72
T+ +Q + Q + PRRK RF+ +R+ + GD + V G+ + K
Sbjct 313 TSQTDNEQPQGETAQKRTPRRKGRFVNRRRRTTKSEGDQSGVEAGAKTDDRK 364
> Hs18562225
Length=130
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 30/67 (44%), Gaps = 3/67 (4%)
Query 37 QSQQPRRKWRFIQGQRQQHGGDPASVPGGSSNNGSKGKTFAAPVLN---ASPCYVLLHFV 93
QSQ R W Q Q GGD S S N S A L+ +PC +LH+
Sbjct 54 QSQAQRGHWAPGAAQIQSRGGDCCSRAPRSGYNVSGASDPPARRLDNLRENPCAPILHYR 113
Query 94 LSVFSAS 100
L++FS S
Sbjct 114 LAIFSCS 120
> 7295685
Length=418
Score = 29.3 bits (64), Expect = 2.0, Method: Composition-based stats.
Identities = 20/70 (28%), Positives = 27/70 (38%), Gaps = 16/70 (22%)
Query 25 HAQEQQQSQKQPQSQQPRRKWRFIQGQRQQHGGDPAS--------------VPGGSSNNG 70
H Q +Q Q Q QS +P +R G + + P + VPGG G
Sbjct 216 HKQSHEQDQDQEQSSEPFNAFR--DGADEHNTSTPKTNDEDLGLDDDDEDYVPGGEETMG 273
Query 71 SKGKTFAAPV 80
+K K PV
Sbjct 274 NKRKRIKKPV 283
> At4g20320
Length=553
Score = 28.5 bits (62), Expect = 2.8, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 26/57 (45%), Gaps = 7/57 (12%)
Query 22 WTTHAQEQQQSQKQPQSQQPRRKWRFIQGQRQQHGGDPASVPGGSSNNGSKGKTFAA 78
W + A + +Q K+ + W+ ++G D VPGG + G +GK AA
Sbjct 325 WIS-ASDLEQGAKKENPDAYKAAWKLLKG------ADGVLVPGGFGSRGVEGKMLAA 374
> Hs20537937
Length=617
Score = 28.5 bits (62), Expect = 3.4, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 7/52 (13%)
Query 43 RKWRFI---QGQRQQHG----GDPASVPGGSSNNGSKGKTFAAPVLNASPCY 87
++WR + R QHG G+ V GG SN +KGKT V P Y
Sbjct 325 QEWRSLAPMDAPRYQHGIAVIGNFLYVVGGQSNYDTKGKTAVDTVFRFDPRY 376
> CE04882
Length=1610
Score = 28.5 bits (62), Expect = 3.6, Method: Composition-based stats.
Identities = 13/46 (28%), Positives = 23/46 (50%), Gaps = 0/46 (0%)
Query 1 HQQTGLGMPPSAAAGAACTASWTTHAQEQQQSQKQPQSQQPRRKWR 46
H G MPP+ + T + +T +Q ++P S+ PR++ R
Sbjct 440 HALFGSSMPPTVQSLNKLTGARSTPDTPKQLKPEEPASETPRKRQR 485
> At5g52910
Length=1141
Score = 28.1 bits (61), Expect = 3.7, Method: Composition-based stats.
Identities = 19/74 (25%), Positives = 29/74 (39%), Gaps = 0/74 (0%)
Query 2 QQTGLGMPPSAAAGAACTASWTTHAQEQQQSQKQPQSQQPRRKWRFIQGQRQQHGGDPAS 61
+Q GL +P + A +S+ + RK R Q +QQ G
Sbjct 976 KQLGLRLPRGKKSEAGMMLKDDHDDSSADESEDETLLAFKNRKSRKNQKNKQQTGSINEI 1035
Query 62 VPGGSSNNGSKGKT 75
PGGS +N + +T
Sbjct 1036 TPGGSEDNTERNET 1049
> Hs15741230
Length=604
Score = 27.3 bits (59), Expect = 7.0, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 19/40 (47%), Gaps = 4/40 (10%)
Query 52 RQQHG----GDPASVPGGSSNNGSKGKTFAAPVLNASPCY 87
R QHG G+ V GG SN +KGKT V P Y
Sbjct 328 RYQHGIAVIGNFLYVVGGQSNYDTKGKTAVDTVFRFDPRY 367
Lambda K H
0.313 0.124 0.383
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 1181107380
Database: kyva
Posted date: Jul 3, 2009 9:03 AM
Number of letters in database: 47,500,486
Number of sequences in database: 112,920
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40