bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: kyva
112,920 sequences; 47,500,486 total letters
Query= Eten_6517_orf1
Length=109
Score E
Sequences producing significant alignments: (Bits) Value
YLR433c 30.8 0.57
7297380 29.6 1.4
Hs20555377 29.6 1.5
7302610 28.9 2.3
CE22814 28.9 2.3
YML072c 28.9 2.6
Hs4504497 28.5 3.1
Hs22052226 27.7 5.9
YOR127w_2 27.7 5.9
7292542 27.7 5.9
Hs4758164 27.7 6.1
CE01937 26.9 8.2
Hs4507831 26.9 8.7
> YLR433c
Length=553
Score = 30.8 bits (68), Expect = 0.57, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Query 8 SSLALCASSFDTPPSAPSTSLATSSATSSATSSATTPCSHAPSSS---DESRRR 58
S L +C+ P S P + T A ++AT TP SS+ DE+RR+
Sbjct 403 SILNICSEQELDPESEPKAAEETVKARANATKETGTPSDEKASSAILEDETRRK 456
> 7297380
Length=643
Score = 29.6 bits (65), Expect = 1.4, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Query 17 FDTPPSAPSTSLATSSATSSATSSATTPCSHAPSSSDESRRRRAPRCW-EFFSTMKQCIT 75
+ PP+ P+ +A A S P + P SS +S R R R + FS + + +T
Sbjct 465 LEMPPAKPNDHYVERNANQQALPSQEIPNAPTPKSSPQSDRPRDVRSYTNPFSAIGKEVT 524
Query 76 RK 77
R+
Sbjct 525 RQ 526
> Hs20555377
Length=835
Score = 29.6 bits (65), Expect = 1.5, Method: Composition-based stats.
Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 0/47 (0%)
Query 9 SLALCASSFDTPPSAPSTSLATSSATSSATSSATTPCSHAPSSSDES 55
+L+L ++S D PPS+ S S+ + S + S T H+ S D++
Sbjct 24 ALSLSSTSDDEPPSSVSHGAKASTTSLSGSDSETEGKQHSSDSFDDA 70
> 7302610
Length=1268
Score = 28.9 bits (63), Expect = 2.3, Method: Composition-based stats.
Identities = 23/82 (28%), Positives = 34/82 (41%), Gaps = 6/82 (7%)
Query 22 SAPSTSLATSSATSSATSSATTPCSHAPSSSDESRRRRAPRCWEFFSTMKQCITRKATAS 81
SA S S A+ S + TSS T H P + R++ +F + I ++ T
Sbjct 74 SAQSQSGASGSTLARVTSSQKTHIVHVP-----CKERKSTESEKFGEGESKRICQQITKE 128
Query 82 VAASADVA-RSTRAPLERLRKI 102
A ++A R P E R I
Sbjct 129 TGAQIEIASRQVTVPREHFRVI 150
> CE22814
Length=421
Score = 28.9 bits (63), Expect = 2.3, Method: Composition-based stats.
Identities = 12/43 (27%), Positives = 18/43 (41%), Gaps = 0/43 (0%)
Query 19 TPPSAPSTSLATSSATSSATSSATTPCSHAPSSSDESRRRRAP 61
+PP +P ++ S +S + TP APS R P
Sbjct 49 SPPGSPPFAVDRKSVDNSVVAVTDTPFEFAPSQKSSQHTNRPP 91
> YML072c
Length=1545
Score = 28.9 bits (63), Expect = 2.6, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 33/80 (41%), Gaps = 1/80 (1%)
Query 15 SSFDTPPSAPSTSLA-TSSATSSATSSATTPCSHAPSSSDESRRRRAPRCWEFFSTMKQC 73
+S D PS P+TS A SA+ + T S + S R R F T+
Sbjct 1353 ASLDYDPSVPNTSYAPVQSASPVVKPTDNTSSSSNKKDTPSSNSRGHSRASSFARTLAPH 1412
Query 74 ITRKATASVAASADVARSTR 93
T +V A+ +VA+ +
Sbjct 1413 GTYNGFITVVAAENVAKHVQ 1432
> Hs4504497
Length=360
Score = 28.5 bits (62), Expect = 3.1, Method: Composition-based stats.
Identities = 12/23 (52%), Positives = 18/23 (78%), Gaps = 0/23 (0%)
Query 24 PSTSLATSSATSSATSSATTPCS 46
P +A+SSA+ AT+S+T+PCS
Sbjct 142 PVEKVASSSASGWATASSTSPCS 164
> Hs22052226
Length=674
Score = 27.7 bits (60), Expect = 5.9, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query 15 SSFDTPPSAPSTSLATSSATSSATSSATTP-CSHAPSSSDESRRRR 59
S TPP +P SS + S TS++T P + P+S E R+ R
Sbjct 52 SECSTPPQSPLNIDTLSSCSQSQTSASTLPRIAVNPASLGERRKDR 97
> YOR127w_2
Length=884
Score = 27.7 bits (60), Expect = 5.9, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 7/57 (12%)
Query 42 TTPCSHAPSSSDESRRRRAPRCWEFFSTMK-------QCITRKATASVAASADVARS 91
+ P H ++S +R P+ W+FFS+ K Q ++ T S+ SA V S
Sbjct 556 SPPVKHVATASSVARSSVKPKFWKFFSSAKPQTEQSIQGVSTNNTNSIVKSAPVLLS 612
> 7292542
Length=1301
Score = 27.7 bits (60), Expect = 5.9, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 7/50 (14%)
Query 19 TPPSAPSTSL-ATSSATSSATSSATTPCSHAPSS------SDESRRRRAP 61
TPP+AP T + T+S + S T +T P SS S + R R AP
Sbjct 849 TPPAAPGTPVPGTTSPSPSTTIISTLPVPATASSNASRPTSSKQRSRHAP 898
> Hs4758164
Length=674
Score = 27.7 bits (60), Expect = 6.1, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query 15 SSFDTPPSAPSTSLATSSATSSATSSATTP-CSHAPSSSDESRRRR 59
S TPP +P SS + S TS++T P + P+S E R+ R
Sbjct 52 SECSTPPQSPLNIDTLSSCSQSQTSASTLPRIAVNPASLGERRKDR 97
> CE01937
Length=1216
Score = 26.9 bits (58), Expect = 8.2, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 25/42 (59%), Gaps = 4/42 (9%)
Query 13 CASSFDTP--PSAPSTSLATSSATSSATSSATTPCSHAPSSS 52
CA S T PS P + +TS +T SAT ++TT + PS+S
Sbjct 814 CARSHTTTVEPSTPLETASTSQSTPSATLTSTT--ENIPSTS 853
> Hs4507831
Length=1050
Score = 26.9 bits (58), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 4/36 (11%)
Query 19 TPPSAPSTSLATSSATSSATSSA----TTPCSHAPS 50
TPP P T + ++ T SA+SSA PCS AP+
Sbjct 764 TPPQGPRTRMFSAGPTGSASSSARHLVPGPCSEAPA 799
Lambda K H
0.314 0.115 0.350
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 1199474506
Database: kyva
Posted date: Jul 3, 2009 9:03 AM
Number of letters in database: 47,500,486
Number of sequences in database: 112,920
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40