bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.24+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: kyva
           112,920 sequences; 47,500,486 total letters



Query=  Eten_5294_orf2
Length=65
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  YPL164c                                                             29.3    1.9
  SPCC320.05                                                          26.9    8.5


> YPL164c
Length=715

 Score = 29.3 bits (64),  Expect = 1.9, Method: Composition-based stats.
 Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 5/40 (12%)

Query  11   VMRDFVAC-----LDLFMFILLTSVNTDTFVRRDARFCCM  45
            V+ D  AC     L+   + LLT V T TFV RD + CC+
Sbjct  520  VLVDQHACDERIRLEELFYSLLTEVVTGTFVARDLKDCCI  559


> SPCC320.05
Length=667

 Score = 26.9 bits (58),  Expect = 8.5, Method: Composition-based stats.
 Identities = 12/36 (33%), Positives = 22/36 (61%), Gaps = 0/36 (0%)

Query  4    TQTLLSGVMRDFVACLDLFMFILLTSVNTDTFVRRD  39
            TQ+L +GVM  F+A +D  + +   S+ T+  +R +
Sbjct  330  TQSLQTGVMCSFLAFIDTVIAVKAISLQTNNLIRSN  365



Lambda     K      H
   0.339    0.143    0.474 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 1166657202


  Database: kyva
    Posted date:  Jul 3, 2009  9:03 AM
  Number of letters in database: 47,500,486
  Number of sequences in database:  112,920



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40