bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: kyva 112,920 sequences; 47,500,486 total letters Query= Eten_5217_orf2 Length=110 Score E Sequences producing significant alignments: (Bits) Value CE20289 30.8 0.66 7301534 30.4 0.75 CE08425 30.0 1.1 7290757 29.6 1.3 YDR294c 29.6 1.4 Hs18550690 28.9 2.6 Hs4502079 28.5 3.3 Hs20543870 28.1 3.7 7301558_1 27.7 5.5 > CE20289 Length=354 Score = 30.8 bits (68), Expect = 0.66, Method: Composition-based stats. Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 0/30 (0%) Query 48 QQQRSSSARRPRLPVAPLSPGATRLRPPPP 77 Q++ RRPR AP SP + RP PP Sbjct 135 QERVHQPERRPRRSAAPASPAKPQYRPQPP 164 > 7301534 Length=452 Score = 30.4 bits (67), Expect = 0.75, Method: Composition-based stats. Identities = 23/70 (32%), Positives = 29/70 (41%), Gaps = 4/70 (5%) Query 5 RSGNSKCTDRTEGLNCFCCLRGVGFGLGGVVA-GQLQDQQQQQQQQQRSSSARRPR---L 60 RSG + R GL +CCLR VG + G + S+ R+PR L Sbjct 379 RSGFVQLMHRMPGLRRWCCLRSVGDRMNATSGTGPALPLNRMNTSTTYISARRKPRATSL 438 Query 61 PVAPLSPGAT 70 PLS G T Sbjct 439 RANPLSCGET 448 > CE08425 Length=1657 Score = 30.0 bits (66), Expect = 1.1, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 10/65 (15%) Query 41 DQQQQQQQQQRSSSARRPRLPVAPLSPGATRLRPPPPHSHPCSRVEGCWTAAANTGD-PG 99 + Q Q Q + SA PR PVAP+ P + PP P W ++ +TGD P Sbjct 613 ENSQYQVDQHPAESAAPPR-PVAPMEP---LFKQAPPQPDPFG-----WDSSGHTGDAPT 663 Query 100 VSKGV 104 S+ V Sbjct 664 ASEPV 668 > 7290757 Length=1123 Score = 29.6 bits (65), Expect = 1.3, Method: Composition-based stats. Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 0/37 (0%) Query 35 VAGQLQDQQQQQQQQQRSSSARRPRLPVAPLSPGATR 71 V+ + D ++ Q+ RS+ RR + P PL P +TR Sbjct 1075 VSPEQSDDPDERSQRGRSAYTRRTQSPPDPLEPWSTR 1111 > YDR294c Length=589 Score = 29.6 bits (65), Expect = 1.4, Method: Composition-based stats. Identities = 20/64 (31%), Positives = 26/64 (40%), Gaps = 4/64 (6%) Query 51 RSSSARRPRLPVAPLSPGATRLRPPPPHSHPCSRVEGCWTAAANTGDPGVSKG----VGA 106 R+S R + V P G P S P + V GCW N G+ G + VGA Sbjct 394 RNSDLRMHQYYVNPAWTGGLYGSPTLAGSRPGAIVVGCWATMVNMGENGYIESCQEIVGA 453 Query 107 FLSF 110 + F Sbjct 454 AMKF 457 > Hs18550690 Length=630 Score = 28.9 bits (63), Expect = 2.6, Method: Compositional matrix adjust. Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 0/46 (0%) Query 4 GRSGNSKCTDRTEGLNCFCCLRGVGFGLGGVVAGQLQDQQQQQQQQ 49 RS + +C C +G+G+GL V+ L+ QQ Q+ Q+ Sbjct 576 ARSQKENLNYKHLEDHCSQCSQGMGYGLPRVLGSALEKQQAQEPQK 621 > Hs4502079 Length=776 Score = 28.5 bits (62), Expect = 3.3, Method: Composition-based stats. Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 1/40 (2%) Query 43 QQQQQQQQRSSSARRPRL-PVAPLSPGATRLRPPPPHSHP 81 Q QQ + A P + P P+ GAT L P P++ P Sbjct 98 QMPPQQDWKGPPAASPAMSPTTPVVTGATSLPTPAPYAMP 137 > Hs20543870 Length=612 Score = 28.1 bits (61), Expect = 3.7, Method: Compositional matrix adjust. Identities = 18/65 (27%), Positives = 29/65 (44%), Gaps = 7/65 (10%) Query 31 LGGVVAGQLQDQQQQQQQQQRSSSARRPRLPVAP----LSPGATRLRPPPPHSHPCSRVE 86 L G+ G+ QD + + +Q + +LPV L R ++HPC ++E Sbjct 507 LSGMREGRKQDFWEGKAKQAFPQKGKESKLPVMEKDKRLQNNTLR---SSAYNHPCCKLE 563 Query 87 GCWTA 91 CW A Sbjct 564 SCWKA 568 > 7301558_1 Length=951 Score = 27.7 bits (60), Expect = 5.5, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 26/59 (44%), Gaps = 0/59 (0%) Query 26 GVGFGLGGVVAGQLQDQQQQQQQQQRSSSARRPRLPVAPLSPGATRLRPPPPHSHPCSR 84 G+ + + ++QDQ+++Q+Q S+ +P A SPG H C R Sbjct 816 GIQLSVSKLKVSEMQDQERRQRQLLSGSAQSLQAMPEAVGSPGIWAPDSIATHCTACER 874 Lambda K H 0.318 0.136 0.442 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1195973986 Database: kyva Posted date: Jul 3, 2009 9:03 AM Number of letters in database: 47,500,486 Number of sequences in database: 112,920 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40