bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: kyva 112,920 sequences; 47,500,486 total letters Query= Eten_4484_orf1 Length=52 Score E Sequences producing significant alignments: (Bits) Value Hs14670354 95.9 2e-20 Hs14670350 95.1 3e-20 Hs14670358 55.1 3e-08 Hs14670356 52.8 1e-07 Hs14670352 52.4 2e-07 Hs20541281 36.2 0.015 Hs4507031 29.3 1.6 Hs22067039 29.3 1.8 > Hs14670354 Length=977 Score = 95.9 bits (237), Expect = 2e-20, Method: Composition-based stats. Identities = 47/52 (90%), Positives = 49/52 (94%), Gaps = 0/52 (0%) Query 1 AAVTLMEESEDPDYYQYNIQAGPSETDDVDDKLPLSKSLQGSHHSSEGNEGT 52 AAVT+ EESEDPDYYQYNIQAGPSETDDVD+K PLSK LQGSHHSSEGNEGT Sbjct 235 AAVTVKEESEDPDYYQYNIQAGPSETDDVDEKQPLSKPLQGSHHSSEGNEGT 286 > Hs14670350 Length=998 Score = 95.1 bits (235), Expect = 3e-20, Method: Composition-based stats. Identities = 47/52 (90%), Positives = 49/52 (94%), Gaps = 0/52 (0%) Query 1 AAVTLMEESEDPDYYQYNIQAGPSETDDVDDKLPLSKSLQGSHHSSEGNEGT 52 AAVT+ EESEDPDYYQYNIQAGPSETDDVD+K PLSK LQGSHHSSEGNEGT Sbjct 235 AAVTVKEESEDPDYYQYNIQAGPSETDDVDEKQPLSKPLQGSHHSSEGNEGT 286 > Hs14670358 Length=274 Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 30/52 (57%), Positives = 31/52 (59%), Gaps = 20/52 (38%) Query 1 AAVTLMEESEDPDYYQYNIQAGPSETDDVDDKLPLSKSLQGSHHSSEGNEGT 52 AAVT+ EESEDPDYYQYNI QGSHHSSEGNEGT Sbjct 235 AAVTVKEESEDPDYYQYNI--------------------QGSHHSSEGNEGT 266 > Hs14670356 Length=957 Score = 52.8 bits (125), Expect = 1e-07, Method: Composition-based stats. Identities = 30/52 (57%), Positives = 31/52 (59%), Gaps = 20/52 (38%) Query 1 AAVTLMEESEDPDYYQYNIQAGPSETDDVDDKLPLSKSLQGSHHSSEGNEGT 52 AAVT+ EESEDPDYYQYNI QGSHHSSEGNEGT Sbjct 235 AAVTVKEESEDPDYYQYNI--------------------QGSHHSSEGNEGT 266 > Hs14670352 Length=978 Score = 52.4 bits (124), Expect = 2e-07, Method: Composition-based stats. Identities = 30/52 (57%), Positives = 31/52 (59%), Gaps = 20/52 (38%) Query 1 AAVTLMEESEDPDYYQYNIQAGPSETDDVDDKLPLSKSLQGSHHSSEGNEGT 52 AAVT+ EESEDPDYYQYNI QGSHHSSEGNEGT Sbjct 235 AAVTVKEESEDPDYYQYNI--------------------QGSHHSSEGNEGT 266 > Hs20541281 Length=262 Score = 36.2 bits (82), Expect = 0.015, Method: Compositional matrix adjust. Identities = 19/40 (47%), Positives = 29/40 (72%), Gaps = 3/40 (7%) Query 2 AVTLMEESEDPDYYQYNIQAG-PSETDD--VDDKLPLSKS 38 AV++ +ESEDP+YYQYN+Q PS T + ++ +LP+ S Sbjct 104 AVSVKKESEDPNYYQYNMQGSHPSSTSNEVIEMELPMEDS 143 > Hs4507031 Length=664 Score = 29.3 bits (64), Expect = 1.6, Method: Composition-based stats. Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 0/31 (0%) Query 7 EESEDPDYYQYNIQAGPSETDDVDDKLPLSK 37 EE D D + NIQ GP ET +++ ++P K Sbjct 568 EERIDLDAEEENIQEGPKETIEIETQVPEKK 598 > Hs22067039 Length=676 Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust. Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 7/47 (14%) Query 1 AAVTLMEESEDPDY-------YQYNIQAGPSETDDVDDKLPLSKSLQ 40 AAVT+ EESEDPDY ++ Q G + + +P K LQ Sbjct 154 AAVTVKEESEDPDYDYITFKDFKSRWQKGKALQKPTEVPVPYEKMLQ 200 Score = 28.1 bits (61), Expect = 4.5, Method: Compositional matrix adjust. Identities = 12/14 (85%), Positives = 13/14 (92%), Gaps = 0/14 (0%) Query 1 AAVTLMEESEDPDY 14 AAVT+ EESEDPDY Sbjct 294 AAVTVKEESEDPDY 307 Lambda K H 0.299 0.122 0.335 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1158678716 Database: kyva Posted date: Jul 3, 2009 9:03 AM Number of letters in database: 47,500,486 Number of sequences in database: 112,920 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40