bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.24+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: kyva
           112,920 sequences; 47,500,486 total letters



Query=  Eten_4341_orf1
Length=110
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  CE23705                                                             29.3    1.9
  At3g28030                                                           29.3    1.9
  CE28928                                                             28.9    2.2


> CE23705
Length=694

 Score = 29.3 bits (64),  Expect = 1.9, Method: Composition-based stats.
 Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 0/40 (0%)

Query  40   KRRTMDRARPVLRSQTRTAKRRKNENTNTKRRKRKKRSTG  79
            +R+ M +A+  L +     +RRKN+N N  +   +KR+ G
Sbjct  507  RRQRMTKAQMSLMTDEEKVERRKNQNRNYSKTHVQKRNRG  546


> At3g28030
Length=1482

 Score = 29.3 bits (64),  Expect = 1.9, Method: Composition-based stats.
 Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 0/32 (0%)

Query  45   DRARPVLRSQTRTAKRRKNENTNTKRRKRKKR  76
            D A P L+ +T  A+RR+ EN  TK RK  ++
Sbjct  77   DGATPALKRRTVIARRRQRENAQTKIRKTAEK  108


> CE28928
Length=360

 Score = 28.9 bits (63),  Expect = 2.2, Method: Compositional matrix adjust.
 Identities = 14/44 (31%), Positives = 27/44 (61%), Gaps = 1/44 (2%)

Query  2    SKREMHRGLVACRKQKFKQMKTTTIMVEKSPK-PTKTLKKRRTM  44
            +K+ MH+  V CR  +     ++++  E++ K PT T+K+RR +
Sbjct  242  TKKNMHKITVVCRYIENHYYISSSLFSEETSKIPTSTMKERRVL  285



Lambda     K      H
   0.320    0.127    0.353 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 1195973986


  Database: kyva
    Posted date:  Jul 3, 2009  9:03 AM
  Number of letters in database: 47,500,486
  Number of sequences in database:  112,920



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40