bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.24+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: kyva
           112,920 sequences; 47,500,486 total letters



Query=  Eten_4305_orf2
Length=61
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  At1g77700                                                           28.1    3.7


> At1g77700
Length=356

 Score = 28.1 bits (61),  Expect = 3.7, Method: Composition-based stats.
 Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 0/32 (0%)

Query  19   SKFHLYFFLIPSHISFPHISFIISLILKHFFY  50
            S+F L+ FL  SH  F + S  +S IL H FY
Sbjct  301  SRFVLFTFLTTSHDYFNYDSNQVSFILDHDFY  332



Lambda     K      H
   0.338    0.150    0.468 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 1178852562


  Database: kyva
    Posted date:  Jul 3, 2009  9:03 AM
  Number of letters in database: 47,500,486
  Number of sequences in database:  112,920



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40