bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: kyva
112,920 sequences; 47,500,486 total letters
Query= Eten_4037_orf2
Length=127
Score E
Sequences producing significant alignments: (Bits) Value
CE24446 35.0 0.038
CE25593 32.0 0.26
At2g23190 32.0 0.30
CE09591 29.6 1.6
Hs12963481 28.9 2.5
At5g13800 28.5 3.1
At2g11010 28.1 3.7
CE27164 27.7 4.8
CE08393 27.7 5.2
CE20497 27.7 6.1
Hs11386193 27.3 6.1
Hs22050752 26.9 8.0
> CE24446
Length=564
Score = 35.0 bits (79), Expect = 0.038, Method: Composition-based stats.
Identities = 27/75 (36%), Positives = 37/75 (49%), Gaps = 13/75 (17%)
Query 25 TKIFSKELFPFLGQNPLPCGKNHFFCQNPFFLKKAIFVWKTIFFWKNPFFLGKTFFFAKH 84
T++++K++ FL +N K F +N F F K FF FFL K +F K
Sbjct 384 TQLYNKKISGFLDKNEF---KKMFGLKNSLFW---FFSAKLNFF---VFFLQKWWFSVKK 434
Query 85 HFFF----KKNSNFQ 95
HFFF K +NFQ
Sbjct 435 HFFFVLLQKNFANFQ 449
> CE25593
Length=856
Score = 32.0 bits (71), Expect = 0.26, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 27/52 (51%), Gaps = 5/52 (9%)
Query 46 NHFFCQ----NPFFLKK-AIFVWKTIFFWKNPFFLGKTFFFAKHHFFFKKNS 92
N FF + NPFF KK V++ F K+ FF+ K F + FF K NS
Sbjct 713 NKFFNEKSEKNPFFGKKWKKVVFQKFHFEKSNFFIKKKIFHFRQAFFQKNNS 764
Score = 27.7 bits (60), Expect = 5.5, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 5/57 (8%)
Query 19 FFPNPPTKIFSK--ELFPFLGQN--PLPCGKNHFFCQNPFFLKKAIFVWKTIFFWKN 71
+F + K F++ E PF G+ + K HF N FF+KK IF ++ FF KN
Sbjct 707 WFSSTSNKFFNEKSEKNPFFGKKWKKVVFQKFHFEKSN-FFIKKKIFHFRQAFFQKN 762
> At2g23190
Length=543
Score = 32.0 bits (71), Expect = 0.30, Method: Composition-based stats.
Identities = 29/87 (33%), Positives = 36/87 (41%), Gaps = 13/87 (14%)
Query 41 LPCGKNHFFCQNPFFLKKAIFVWKTIFFWKNPFFLGKTFFFAKHHFFFKKNSNFQPPESR 100
LPC H + K + +T F + FL FF + F K++S F P S
Sbjct 31 LPCSVQHIY--------KFFDLMETHFLILSLAFL---FFISLKLLFGKRHSKFNLPPSP 79
Query 101 ANNPPPPFGGFFFFGPTPQGRLFLSFS 127
A P PF G P R FLSFS
Sbjct 80 AR--PLPFIGHLHLLKQPLHRTFLSFS 104
> CE09591
Length=1121
Score = 29.6 bits (65), Expect = 1.6, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 26/63 (41%), Gaps = 2/63 (3%)
Query 1 KKNLPETPGGKRPL--PPRGFFPNPPTKIFSKELFPFLGQNPLPCGKNHFFCQNPFFLKK 58
KK PE K L PP GF P P ++ P Q ++HF QN F ++
Sbjct 580 KKTFPEPKFKKVFLGRPPHGFLPEPDYELKEDAYPPGFEQGTFRQRQDHFDNQNADFFQQ 639
Query 59 AIF 61
F
Sbjct 640 KFF 642
> Hs12963481
Length=835
Score = 28.9 bits (63), Expect = 2.5, Method: Composition-based stats.
Identities = 10/20 (50%), Positives = 13/20 (65%), Gaps = 0/20 (0%)
Query 57 KKAIFVWKTIFFWKNPFFLG 76
KK +F+W+T FW FLG
Sbjct 483 KKKVFLWRTAAFWAFTVFLG 502
> At5g13800
Length=484
Score = 28.5 bits (62), Expect = 3.1, Method: Composition-based stats.
Identities = 14/28 (50%), Positives = 15/28 (53%), Gaps = 0/28 (0%)
Query 15 PPRGFFPNPPTKIFSKELFPFLGQNPLP 42
P GFFPNP LFP+ G PLP
Sbjct 248 PFWGFFPNPVRSPKLARLFPWPGAFPLP 275
> At2g11010
Length=693
Score = 28.1 bits (61), Expect = 3.7, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Query 54 FFLKKAIFVWKTIFFWKNPFFLGKTFFFAKHHFFFKK-NSNFQPPESRANN 103
+ + AIF W F ++ F FFF F F N + + PES + N
Sbjct 24 YIVHVAIFGWSRTFEQRSSLFYSTNFFFEHRIFLFSTMNPDTERPESPSFN 74
> CE27164
Length=803
Score = 27.7 bits (60), Expect = 4.8, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 26/67 (38%), Gaps = 2/67 (2%)
Query 46 NHFFCQNPFFLKKAIFVWKTIFFWKNPFFLGKTFFFAKHHFFFKKNSNFQPPESRANNPP 105
N F C+ LK K I ++N L FFF K + FK PP + PP
Sbjct 690 NVFVCE--INLKSNFSEKKPILEFQNTITLVLVFFFFKKNPTFKHTYKKTPPHNYVYPPP 747
Query 106 PPFGGFF 112
P G
Sbjct 748 PKPGAIL 754
> CE08393
Length=212
Score = 27.7 bits (60), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 10/14 (71%), Positives = 11/14 (78%), Gaps = 0/14 (0%)
Query 61 FVWKTIFFWKNPFF 74
FVW+ I FWKN FF
Sbjct 148 FVWEKIIFWKNRFF 161
> CE20497
Length=340
Score = 27.7 bits (60), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 15/65 (23%), Positives = 26/65 (40%), Gaps = 0/65 (0%)
Query 29 SKELFPFLGQNPLPCGKNHFFCQNPFFLKKAIFVWKTIFFWKNPFFLGKTFFFAKHHFFF 88
S+EL LPC + +F F + K +W + ++ N + F H F +
Sbjct 172 SQELLKLKYLEILPCPIDLYFNSCSFAVVKQFDIWSGLAYFTNIMIAIEIIFLIVHSFIY 231
Query 89 KKNSN 93
+ S
Sbjct 232 LRKSQ 236
> Hs11386193
Length=1029
Score = 27.3 bits (59), Expect = 6.1, Method: Composition-based stats.
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 7/46 (15%)
Query 37 GQNPLPCGKNHFFCQNPFFLKKAIFVWKTIFFWKNPFF---LGKTF 79
G+ P C K CQ F LKK++ + + I + P+ GKTF
Sbjct 506 GEEPYKCNK----CQKAFILKKSLILHQRIHSGEKPYKCDECGKTF 547
> Hs22050752
Length=244
Score = 26.9 bits (58), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 12/19 (63%), Positives = 13/19 (68%), Gaps = 2/19 (10%)
Query 43 CGK--NHFFCQNPFFLKKA 59
CG NHFFC+ P FLK A
Sbjct 169 CGHRLNHFFCEMPVFLKLA 187
Lambda K H
0.329 0.150 0.531
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 1176738752
Database: kyva
Posted date: Jul 3, 2009 9:03 AM
Number of letters in database: 47,500,486
Number of sequences in database: 112,920
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40