bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: kyva
112,920 sequences; 47,500,486 total letters
Query= Eten_3826_orf4
Length=91
Score E
Sequences producing significant alignments: (Bits) Value
Hs11321573 115 3e-26
CE02803 31.6 0.32
CE07139 29.3 1.7
SPBC1685.14c 28.9 2.2
Hs20542050 28.9 2.6
At3g15770 28.1 4.4
Hs22061210 28.1 4.6
At1g71360 27.7 5.2
Hs7661686 27.7 5.3
> Hs11321573
Length=1603
Score = 115 bits (287), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 71/90 (78%), Positives = 79/90 (87%), Gaps = 0/90 (0%)
Query 2 QLQASTPPQFVQAQAQPSSSSRQRQEQPKSHNHSTIEWGKMAEQWLQKKEAERRKQKQRM 61
QLQAST PQ QAQ QPSSSSRQRQ+QPKS++H+ I+WGKMAEQWLQ+KEAERRKQKQR+
Sbjct 1514 QLQASTTPQSAQAQPQPSSSSRQRQQQPKSNSHAAIDWGKMAEQWLQEKEAERRKQKQRL 1573
Query 62 TPWPSPSPMIESPPKFIAGDSPPLLGEMDR 91
TP PSPSPMIES P IAGD+ PLL EMDR
Sbjct 1574 TPRPSPSPMIESTPMSIAGDATPLLDEMDR 1603
> CE02803
Length=808
Score = 31.6 bits (70), Expect = 0.32, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 5/60 (8%)
Query 5 ASTPPQFVQAQAQPSSSSR-----QRQEQPKSHNHSTIEWGKMAEQWLQKKEAERRKQKQ 59
A T Q Q Q + S + +R E+ + TI+ K Q LQ E E+RKQKQ
Sbjct 722 ADTADGMPQLQDQDNVSGKLSVLTERSEEALTDYQRTIQSMKQQHQLLQDLEEEKRKQKQ 781
> CE07139
Length=409
Score = 29.3 bits (64), Expect = 1.7, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 21/35 (60%), Gaps = 0/35 (0%)
Query 41 KMAEQWLQKKEAERRKQKQRMTPWPSPSPMIESPP 75
+ AE WL++ E ++ + M+ +P+ + IES P
Sbjct 173 RFAESWLKRSRFEVKEIRVEMSKYPTDTSQIESLP 207
> SPBC1685.14c
Length=801
Score = 28.9 bits (63), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 0/41 (0%)
Query 6 STPPQFVQAQAQPSSSSRQRQEQPKSHNHSTIEWGKMAEQW 46
S P + Q SS Q + P S H IE+GK+ ++W
Sbjct 483 SLRPSKLMLHNQDSSILFQTENAPHSLYHMDIEYGKIVDEW 523
> Hs20542050
Length=1427
Score = 28.9 bits (63), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 13/58 (22%)
Query 41 KMAEQWLQKKEAERRKQKQRMTPWPSPSPMIESP--------PKFIAGDSPPLLGEMD 90
++ + W Q A RK + R TP PSP ++ P PKF LLG++D
Sbjct 754 RVVQVWFQNTRARERKGQFRSTPGGVPSPAVKPPATATPASLPKFNL-----LLGKVD 806
> At3g15770
Length=162
Score = 28.1 bits (61), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
Query 6 STPPQFVQAQAQPSSSSRQRQEQPKSHNHSTIEWGKMAEQWLQKKEAERRKQKQR 60
ST + +Q SSS+ E + NH + W + +QW+ K +E RK R
Sbjct 68 STTNLTIDSQGCGSSSN----EPAEFVNHGLVLWNQTRQQWVGDKRSESRKSVGR 118
> Hs22061210
Length=495
Score = 28.1 bits (61), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 0/47 (0%)
Query 41 KMAEQWLQKKEAERRKQKQRMTPWPSPSPMIESPPKFIAGDSPPLLG 87
K W+ K+E E+ QR+ + S +I SP +F A + P ++G
Sbjct 268 KAYNAWVYKQEVEKTGASQRILRPTNNSNIINSPGEFSARNPPFIMG 314
> At1g71360
Length=459
Score = 27.7 bits (60), Expect = 5.2, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 27/59 (45%), Gaps = 0/59 (0%)
Query 3 LQASTPPQFVQAQAQPSSSSRQRQEQPKSHNHSTIEWGKMAEQWLQKKEAERRKQKQRM 61
L+AS + V+ ++R+E K +W E L+K E E+ K K+R+
Sbjct 336 LEASKREKEVETMRLEVEGMKEREENTKKEAMEMRKWRMRVETELEKAENEKEKVKERL 394
> Hs7661686
Length=1717
Score = 27.7 bits (60), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 14/51 (27%), Positives = 23/51 (45%), Gaps = 0/51 (0%)
Query 40 GKMAEQWLQKKEAERRKQKQRMTPWPSPSPMIESPPKFIAGDSPPLLGEMD 90
G+M W + E RRK +++ P PS + P + A S ++D
Sbjct 1119 GRMLRMWYELDEESRRKYQKKAAACPDPSLSVWRPDIYFASVSETFETKVD 1169
Lambda K H
0.308 0.123 0.373
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 1174483934
Database: kyva
Posted date: Jul 3, 2009 9:03 AM
Number of letters in database: 47,500,486
Number of sequences in database: 112,920
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40