bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: kyva
112,920 sequences; 47,500,486 total letters
Query= Eten_3820_orf1
Length=112
Score E
Sequences producing significant alignments: (Bits) Value
Hs22041368 29.3 1.8
7290128 29.3 2.1
CE05611 28.1 3.9
YDL223c 28.1 3.9
At5g14080 27.3 6.6
Hs18583039 27.3 6.7
7292666 27.3 6.9
Hs14760084 27.3 7.8
Hs22041206 26.9 8.2
Hs19424134 26.9 8.9
> Hs22041368
Length=927
Score = 29.3 bits (64), Expect = 1.8, Method: Composition-based stats.
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Query 1 TSDCVCVCTLISRTYLLRVERQTHTHIHTHTHT--HRERE 38
+ DC T + TY+ E + H H +T HT HR+R+
Sbjct 146 SKDCHIPVTKKALTYVAHNEHKFHAHTYTQVHTCMHRKRD 185
> 7290128
Length=738
Score = 29.3 bits (64), Expect = 2.1, Method: Composition-based stats.
Identities = 9/24 (37%), Positives = 15/24 (62%), Gaps = 0/24 (0%)
Query 23 THTHIHTHTHTHRERETHTHTHAH 46
+H H H H HTH +H++++ H
Sbjct 624 SHAHGHAHQHTHGHAHSHSNSNKH 647
> CE05611
Length=375
Score = 28.1 bits (61), Expect = 3.9, Method: Composition-based stats.
Identities = 9/17 (52%), Positives = 10/17 (58%), Gaps = 0/17 (0%)
Query 30 HTHTHRERETHTHTHAH 46
H H HR+R H HAH
Sbjct 305 HLHVHRDRHYHDERHAH 321
Score = 27.7 bits (60), Expect = 5.6, Method: Composition-based stats.
Identities = 9/30 (30%), Positives = 13/30 (43%), Gaps = 0/30 (0%)
Query 21 RQTHTHIHTHTHTHRERETHTHTHAHARIY 50
++ H H+H H H ER H +Y
Sbjct 302 QENHLHVHRDRHYHDERHAHQDDSQQFSVY 331
> YDL223c
Length=1046
Score = 28.1 bits (61), Expect = 3.9, Method: Composition-based stats.
Identities = 12/23 (52%), Positives = 13/23 (56%), Gaps = 2/23 (8%)
Query 29 THTHTHRERETH--THTHAHARI 49
THTH H T THTH HA +
Sbjct 192 THTHGHSSATTSPVTHTHGHASV 214
Score = 27.7 bits (60), Expect = 4.9, Method: Composition-based stats.
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 10/36 (27%)
Query 23 THTHIH--------THTHTHRERETH--THTHAHAR 48
THTH H THTH H +T T+TH H++
Sbjct 192 THTHGHSSATTSPVTHTHGHASVKTTSPTNTHEHSK 227
Score = 26.9 bits (58), Expect = 8.7, Method: Composition-based stats.
Identities = 13/50 (26%), Positives = 19/50 (38%), Gaps = 0/50 (0%)
Query 23 THTHIHTHTHTHRERETHTHTHAHARIYMVRICIIHVYIKYIQYIERAHT 72
THTH H T TH H+ A+ H+ +K + H+
Sbjct 206 THTHGHASVKTTSPTNTHEHSKANTGPSATATTHGHINVKTTHPVSHGHS 255
> At5g14080
Length=663
Score = 27.3 bits (59), Expect = 6.6, Method: Composition-based stats.
Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 14/90 (15%)
Query 10 LISRTYLLRVERQTHTHIHTHTHTHRERETHTHTHAHARIYMVRICI-----IHVYIKYI 64
L+SR L+R+ H + RERE HT AH ++ C+ + + I+++
Sbjct 566 LMSRYLLIRLVCMCEGHSGEASQLLREREHLEHTGAHV---VLLKCVADAKEVEIGIRHM 622
Query 65 QYIERAHTCLGMRPYMYIVVSGCLRAQPCS 94
Q+I+ + P + +S L A CS
Sbjct 623 QWIKE------VSPSLVHTISSDLLASFCS 646
> Hs18583039
Length=935
Score = 27.3 bits (59), Expect = 6.7, Method: Composition-based stats.
Identities = 11/32 (34%), Positives = 15/32 (46%), Gaps = 0/32 (0%)
Query 4 CVCVCTLISRTYLLRVERQTHTHIHTHTHTHR 35
C+ VC ++ + L QTH H HT R
Sbjct 132 CLAVCEVLPSVHTLGAVVQTHVETHAEGHTDR 163
> 7292666
Length=427
Score = 27.3 bits (59), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query 57 IHVYIKYIQ-YIERAHTCLGMRPYMYIVVSGCLR 89
I VY +I+ Y E+ LG P+M +V + C R
Sbjct 135 IQVYASFIEIYNEKPFDLLGSTPHMPMVAARCQR 168
> Hs14760084
Length=532
Score = 27.3 bits (59), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query 40 HTHTHAHARIYMVRICIIHVYIKYIQYIERAHTCLGMRPYM 80
H TH + Y + C YI+Y ER HT G +PY
Sbjct 469 HERTHTGEKPYECKHCGKAFISNYIRYHERTHT--GEKPYQ 507
> Hs22041206
Length=784
Score = 26.9 bits (58), Expect = 8.2, Method: Composition-based stats.
Identities = 10/24 (41%), Positives = 13/24 (54%), Gaps = 0/24 (0%)
Query 25 THIHTHTHTHRERETHTHTHAHAR 48
TH H R+R+TH H +H R
Sbjct 733 THKDEQNHQRRDRQTHEHEQSHQR 756
> Hs19424134
Length=376
Score = 26.9 bits (58), Expect = 8.9, Method: Composition-based stats.
Identities = 11/32 (34%), Positives = 15/32 (46%), Gaps = 3/32 (9%)
Query 22 QTHTHI-HTHTH--THRERETHTHTHAHARIY 50
Q H H+ H H+H H +H H H H +
Sbjct 185 QAHGHVDHCHSHEVKHGAAHSHDHAHGHGHFH 216
Lambda K H
0.332 0.138 0.473
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 1188972946
Database: kyva
Posted date: Jul 3, 2009 9:03 AM
Number of letters in database: 47,500,486
Number of sequences in database: 112,920
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40