bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: kyva 112,920 sequences; 47,500,486 total letters Query= Eten_3629_orf2 Length=493 Score E Sequences producing significant alignments: (Bits) Value 7303062 33.1 1.5 7294891 32.7 1.9 CE02168 30.4 8.8 Hs4503079 30.4 9.9 > 7303062 Length=601 Score = 33.1 bits (74), Expect = 1.5, Method: Compositional matrix adjust. Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 7/82 (8%) Query 270 SDTLKSGGVQIT--GSAFSQLLRLVGTSSPRYTSKLSAPIVLFQR-----AVGTRISYEI 322 SD+L + V I +S LLR V ++ K I+L +G ++ Y + Sbjct 145 SDSLPTASVVIIFFNEPYSVLLRTVHSTLSTCNEKALKEIILVDDGSDNVELGAKLDYYV 204 Query 323 RVAVPQGCVLLPSDPNLMGLIR 344 R +P G V + N +GLIR Sbjct 205 RTRIPSGKVTILRLKNRLGLIR 226 > 7294891 Length=889 Score = 32.7 bits (73), Expect = 1.9, Method: Compositional matrix adjust. Identities = 32/108 (29%), Positives = 45/108 (41%), Gaps = 7/108 (6%) Query 39 HPDGGESV---FNDLTGASVELPVQPTPPQPPLQGGASSFPQQLLGKHAFVPQAEGTTTT 95 HP GE + N+ SV + P P LQ G + P+QL + Q TTT Sbjct 151 HPKLGEQLDAAINEGVLDSVLSFICPVPMPTQLQNGKTK-PKQLQPPKELLTQTSATTTP 209 Query 96 AGPSLPTQQPATAGYASAFTQFFGSATPAPAVPPTQPQAPAVPAGLPG 143 +P P T+G + + + S P PA P+ AP + PG Sbjct 210 YTNPIPAAAPLTSGASKSMMEIGHSHGPLPAATPS---APCLQQAHPG 254 > CE02168 Length=928 Score = 30.4 bits (67), Expect = 8.8, Method: Compositional matrix adjust. Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 0/30 (0%) Query 72 ASSFPQQLLGKHAFVPQAEGTTTTAGPSLP 101 AS++PQQ G AF+ Q EG P++P Sbjct 787 ASTYPQQTNGNQAFLEQEEGDGEWVWPTVP 816 > Hs4503079 Length=207 Score = 30.4 bits (67), Expect = 9.9, Method: Compositional matrix adjust. Identities = 28/91 (30%), Positives = 36/91 (39%), Gaps = 4/91 (4%) Query 50 LTGASVELPVQPTPPQP----PLQGGASSFPQQLLGKHAFVPQAEGTTTTAGPSLPTQQP 105 L G S+ +P P P L G S L + EG + GP+L T Q Sbjct 82 LLGHSLGIPWAPLSSCPSQALQLAGCLSQLHSGLFLYQGLLQALEGISPELGPTLDTLQL 141 Query 106 ATAGYASAFTQFFGSATPAPAVPPTQPQAPA 136 A +A+ Q APA+ PTQ PA Sbjct 142 DVADFATTIWQQMEELGMAPALQPTQGAMPA 172 Lambda K H 0.316 0.132 0.392 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 13201399880 Database: kyva Posted date: Jul 3, 2009 9:03 AM Number of letters in database: 47,500,486 Number of sequences in database: 112,920 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40