bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: kyva
112,920 sequences; 47,500,486 total letters
Query= Eten_3224_orf2
Length=132
Score E
Sequences producing significant alignments: (Bits) Value
7292297 32.3 0.23
Hs4504803 30.8 0.72
CE02994 30.4 0.86
Hs20546276 29.3 2.0
Hs7669487 28.9 2.5
At1g61210 28.9 2.6
7294321 28.1 4.6
CE26967 27.7 5.4
Hs15826840_2 27.7 5.6
Hs4507611 27.7 6.0
ECU02g1300 27.7 6.7
> 7292297
Length=263
Score = 32.3 bits (72), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 0/39 (0%)
Query 7 NFATQVATSEEIRQLMRQWTGMMGELFRGPDTRESSLPF 45
NF A +EEI ++ +QW+G+ ELF D + P
Sbjct 201 NFKVLSANNEEIGKISKQWSGLGRELFTDADYFSVTFPL 239
> Hs4504803
Length=1142
Score = 30.8 bits (68), Expect = 0.72, Method: Composition-based stats.
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Query 31 ELFRGPDTRESSLPFYWKLPECVLTVDFAAAADAAAFDAAKVEL 74
E + D R+S P +W PEC++ F A+D +F EL
Sbjct 1021 EYYTVKDDRDS--PVFWYAPECLMQSKFYIASDVWSFGVTLHEL 1062
> CE02994
Length=421
Score = 30.4 bits (67), Expect = 0.86, Method: Composition-based stats.
Identities = 13/32 (40%), Positives = 15/32 (46%), Gaps = 0/32 (0%)
Query 43 LPFYWKLPECVLTVDFAAAADAAAFDAAKVEL 74
LPF+W PEC F+ D AF EL
Sbjct 305 LPFFWLAPECFEEYKFSEKTDVWAFGICLYEL 336
> Hs20546276
Length=1292
Score = 29.3 bits (64), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query 46 YWKLPECVLTVDFAAAADAAAFDAAKVELAYSAEYNVLLLQFVE 89
YW EC+ D+ A KVE+A +E NVL L+ VE
Sbjct 868 YWAF-ECLTVRDYNDMICGICGVAPKVEMAQRSEENVLALKSVE 910
> Hs7669487
Length=875
Score = 28.9 bits (63), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 38/98 (38%), Gaps = 11/98 (11%)
Query 27 GMMGELFRGPDTR---ESSLPFYWKLPECVLTVDFAAAADAAAFDAAKVE---LAYSAEY 80
GM L+ G R + LP W EC+L F A+D AF E L + +
Sbjct 748 GMSRNLYAGDYYRVQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEVLMLCRAQPF 807
Query 81 NVLLL-QFVEEAAEWFQVLKRPTPRSQLLHLPVECTVG 117
L Q +E A E+F R R L P C G
Sbjct 808 GQLTDEQVIENAGEFF----RDQGRQVYLSRPPACPQG 841
> At1g61210
Length=282
Score = 28.9 bits (63), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 5/53 (9%)
Query 39 RESSLPFYWKLPECVLTVDFAAAADAAAFDAAKVELAYSAEYNVLLLQFVEEA 91
+ ++ FYW+ C T +A D+ AFD+A+V + A V+ L VEEA
Sbjct 73 KNDAIAFYWQ-SLCGHT----SAVDSVAFDSAEVLVLAGASSGVIKLWDVEEA 120
> 7294321
Length=1120
Score = 28.1 bits (61), Expect = 4.6, Method: Composition-based stats.
Identities = 24/106 (22%), Positives = 45/106 (42%), Gaps = 7/106 (6%)
Query 13 ATSEEIRQLMRQWTGMMGELFRGPDTRESSLPFYWKLPECVLTVDFAAAADAAAFDAAKV 72
+T++++ +L+ + M + G +S P ++ E +T + + + +
Sbjct 347 STTDDVSELVEEPVHEMDDKTDGSAAISASAPQETQVDESQITDEQDHSMEEIVATNESI 406
Query 73 ELAYSAEYNV-------LLLQFVEEAAEWFQVLKRPTPRSQLLHLP 111
E+ Y AE V L+ EE+ + V RPT Q L LP
Sbjct 407 EVTYEAEETVNTSQKQDLITDLDEESEDQVHVDNRPTSTLQALKLP 452
> CE26967
Length=1043
Score = 27.7 bits (60), Expect = 5.4, Method: Composition-based stats.
Identities = 19/81 (23%), Positives = 34/81 (41%), Gaps = 9/81 (11%)
Query 27 GMMGELFRGPDTRESSLPFYWKLPECVLTVDFAAAADAAAFDA------AKVELAYSAEY 80
G+ + +R T LP W PEC+ + F + +D A+ + E+ +
Sbjct 267 GIGEDYYRSEFTPNLKLPIAWCAPECINFLKFTSKSDVWAYGVTIWEMFSYGEMPWKGRS 326
Query 81 NVLLLQFVEEAAEWFQVLKRP 101
+L+ V+ E +L RP
Sbjct 327 GAQILELVDRKKE---LLTRP 344
> Hs15826840_2
Length=275
Score = 27.7 bits (60), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 17/29 (58%), Gaps = 0/29 (0%)
Query 39 RESSLPFYWKLPECVLTVDFAAAADAAAF 67
R++ +P W PE +L DF+ +D AF
Sbjct 169 RQAWVPLRWMSPEAILEGDFSTKSDVWAF 197
> Hs4507611
Length=666
Score = 27.7 bits (60), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 11/79 (13%)
Query 43 LPFYWKLPECVLTVDFAAAADAAAFDAAKVELAYSAEY------NVLLLQFVEEAAEWFQ 96
+P+ W PE + F++A+D F E+ E L+LQ +E+ A
Sbjct 285 IPYTWCAPESLRHGAFSSASDVWMFGVTLWEMFSGGEEPWPGVPPYLILQRLEDRAR--- 341
Query 97 VLKRPTPRSQLLH-LPVEC 114
L RP P S+ L+ L + C
Sbjct 342 -LPRPPPSSRALYSLALRC 359
> ECU02g1300
Length=671
Score = 27.7 bits (60), Expect = 6.7, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 0/54 (0%)
Query 78 AEYNVLLLQFVEEAAEWFQVLKRPTPRSQLLHLPVECTVGPHTSFAAFCGAPQG 131
+E N+ ++ V++A E +K T R +LL++ C +GP + G QG
Sbjct 383 SETNLFKIEVVDDALEKESRIKTLTTRFRLLNIKHNCYLGPSSRKYPSWGFEQG 436
Lambda K H
0.323 0.134 0.420
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 1319765976
Database: kyva
Posted date: Jul 3, 2009 9:03 AM
Number of letters in database: 47,500,486
Number of sequences in database: 112,920
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40