bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: kyva
112,920 sequences; 47,500,486 total letters
Query= Eten_3057_orf2
Length=117
Score E
Sequences producing significant alignments: (Bits) Value
At4g32370 33.5 0.098
Hs20143922 33.5 0.11
Hs20143918 33.5 0.11
Hs20143914 33.5 0.11
Hs20143916 33.1 0.14
Hs19747267 33.1 0.14
Hs5454168 30.4 0.77
Hs14043036 30.4 0.85
Hs4885423 28.9 2.2
Hs7662204 28.9 2.7
7291848 27.7 5.3
CE02277 27.7 5.3
CE27953 26.9 9.3
> At4g32370
Length=503
Score = 33.5 bits (75), Expect = 0.098, Method: Composition-based stats.
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Query 49 EHAQPPRVPPPPPVERQPPAAALGARPARPH---SPLLPALPPAFY 91
++ + P VP PP + +PP PA+P PL+P PP +
Sbjct 375 DYYEEPLVPVEPPQQVEPPTPTKPLAPAKPPRHVGPLMPTKPPTMF 420
> Hs20143922
Length=27118
Score = 33.5 bits (75), Expect = 0.11, Method: Composition-based stats.
Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Query 44 GQRLEEHAQPPRVPPPPPVER-QPPAAALGARPARPHSP 81
GQ+L H PPR+PP P PP+ A A+ AR SP
Sbjct 246 GQQLP-HKTPPRIPPKPKSRSPTPPSIAAKAQLARQQSP 283
> Hs20143918
Length=27051
Score = 33.5 bits (75), Expect = 0.11, Method: Composition-based stats.
Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Query 44 GQRLEEHAQPPRVPPPPPVER-QPPAAALGARPARPHSP 81
GQ+L H PPR+PP P PP+ A A+ AR SP
Sbjct 246 GQQLP-HKTPPRIPPKPKSRSPTPPSIAAKAQLARQQSP 283
> Hs20143914
Length=26926
Score = 33.5 bits (75), Expect = 0.11, Method: Composition-based stats.
Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Query 44 GQRLEEHAQPPRVPPPPPVER-QPPAAALGARPARPHSP 81
GQ+L H PPR+PP P PP+ A A+ AR SP
Sbjct 246 GQQLP-HKTPPRIPPKPKSRSPTPPSIAAKAQLARQQSP 283
> Hs20143916
Length=5604
Score = 33.1 bits (74), Expect = 0.14, Method: Composition-based stats.
Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Query 44 GQRLEEHAQPPRVPPPPPVER-QPPAAALGARPARPHSP 81
GQ+L H PPR+PP P PP+ A A+ AR SP
Sbjct 246 GQQLP-HKTPPRIPPKPKSRSPTPPSIAAKAQLARQQSP 283
> Hs19747267
Length=34350
Score = 33.1 bits (74), Expect = 0.14, Method: Composition-based stats.
Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Query 44 GQRLEEHAQPPRVPPPPPVER-QPPAAALGARPARPHSP 81
GQ+L H PPR+PP P PP+ A A+ AR SP
Sbjct 246 GQQLP-HKTPPRIPPKPKSRSPTPPSIAAKAQLARQQSP 283
> Hs5454168
Length=468
Score = 30.4 bits (67), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Query 51 AQPPRVPPPPPVERQPPAAALGARPARPHSPLLPALPPAFYRLLPAFYR 99
QP VP PPPV Q P +P RP + P Y+ +PA Y+
Sbjct 142 GQPDAVPEPPPVGWQCPGCTFINKPTRPGCEMCCRARPEAYQ-VPASYQ 189
> Hs14043036
Length=500
Score = 30.4 bits (67), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Query 51 AQPPRVPPPPPVERQPPAAALGARPARPHSPLLPALPPAFYRLLPAFYR 99
QP VP PPPV Q P +P RP + P Y+ +PA Y+
Sbjct 174 GQPDAVPEPPPVGWQCPGCTFINKPTRPGCEMCCRARPEAYQ-VPASYQ 221
> Hs4885423
Length=420
Score = 28.9 bits (63), Expect = 2.2, Method: Composition-based stats.
Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 0/43 (0%)
Query 50 HAQPPRVPPPPPVERQPPAAALGARPARPHSPLLPALPPAFYR 92
H PP P P + RP R +PLLP+L P+ R
Sbjct 9 HVPPPLFPSAPATLASRSLSHWRPRPPRQLAPLLPSLAPSSAR 51
> Hs7662204
Length=896
Score = 28.9 bits (63), Expect = 2.7, Method: Composition-based stats.
Identities = 15/28 (53%), Positives = 16/28 (57%), Gaps = 5/28 (17%)
Query 65 QPPAAALGAR-----PARPHSPLLPALP 87
QPP GA P +PH PLLPALP
Sbjct 810 QPPTRIQGAPSSHWLPQQPHFPLLPALP 837
> 7291848
Length=668
Score = 27.7 bits (60), Expect = 5.3, Method: Composition-based stats.
Identities = 11/29 (37%), Positives = 16/29 (55%), Gaps = 0/29 (0%)
Query 60 PPVERQPPAAALGARPARPHSPLLPALPP 88
PP+ R PP A+ ++P PL+P P
Sbjct 273 PPMTRIPPVGAVSSQPLIQTDPLIPIGAP 301
> CE02277
Length=1156
Score = 27.7 bits (60), Expect = 5.3, Method: Composition-based stats.
Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
Query 58 PPPPVERQPPAAALGAR--PARPHSPLLPA 85
PPP + + PPAA++ + P+ P +P PA
Sbjct 228 PPPALGQTPPAASIAPQVVPSVPKTPEAPA 257
> CE27953
Length=1432
Score = 26.9 bits (58), Expect = 9.3, Method: Composition-based stats.
Identities = 16/69 (23%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Query 8 DEAQRRLAAPVVREEAALRYQQVHQQVQ---SVPQQRRCGQRLEEHAQPPRVPPPPPVER 64
D+ Q A VR+ + + + V Q + ++ ++ + L +H P++P PPP +
Sbjct 632 DKMQDEEMAKKVRQATSAKQEAVAMQGEYWKTLCDFQKEAEELRKHINDPKIPLPPPTKM 691
Query 65 QPPAAALGA 73
A + A
Sbjct 692 NLSAPSTSA 700
Lambda K H
0.323 0.137 0.436
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 1171470346
Database: kyva
Posted date: Jul 3, 2009 9:03 AM
Number of letters in database: 47,500,486
Number of sequences in database: 112,920
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40