bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.24+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: kyva
           112,920 sequences; 47,500,486 total letters



Query=  Eten_2472_orf1
Length=89
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  At3g17040                                                           26.9    8.1


> At3g17040
Length=652

 Score = 26.9 bits (58),  Expect = 8.1, Method: Composition-based stats.
 Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 8/62 (12%)

Query  18   NASSPVSLMSSG-STSGRNSYVFPTLAPASLLSDRKNGQGVQGDLLVMCNTVLALCNESS  76
            N S   +L++ G    GRN Y++ TLA    L + K G+  Q   L    T+   CN  S
Sbjct  286  NISKARNLLAKGLKFCGRNEYIYQTLA----LLEAKAGRYEQARYLFKQATI---CNSRS  338

Query  77   CS  78
            C+
Sbjct  339  CA  340



Lambda     K      H
   0.311    0.125    0.347 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 1181033294


  Database: kyva
    Posted date:  Jul 3, 2009  9:03 AM
  Number of letters in database: 47,500,486
  Number of sequences in database:  112,920



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40