bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: kyva
112,920 sequences; 47,500,486 total letters
Query= Eten_2232_orf4
Length=170
Score E
Sequences producing significant alignments: (Bits) Value
CE27552 32.0 0.53
Hs14726886 30.0 2.2
SPCC4G3.07c 30.0 2.5
CE03260 30.0 2.6
7293243 29.3 3.5
Hs11545801 29.3 3.9
Hs7706278 28.5 5.9
Hs18584681 28.5 5.9
Hs18563073 28.5 7.1
Hs4502839 28.1 8.0
Hs22054962 28.1 8.1
CE08047 28.1 8.6
> CE27552
Length=186
Score = 32.0 bits (71), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 0/46 (0%)
Query 119 KGRMTLEGARQRDCPQRLSTLGYVPCSIQPFLRLSHLSSAAGLEEI 164
K R TLE AR+ D P S P ++ HL+ +EEI
Sbjct 36 KMRSTLESARKSDAPSTSSDFSRKPQKVEELTPAEHLARTRAIEEI 81
> Hs14726886
Length=470
Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 36/101 (35%), Gaps = 25/101 (24%)
Query 80 FALCLHAVVPLNQ-------KRAHALDAPWICQEIQDGRSRQKWTVKGRMTLEGARQRDC 132
+ +C H +Q ++ H D P+ C E G SR ++ + T G R DC
Sbjct 137 YHICSHCGKAFSQISDLNRHQKTHTGDRPYKCYECGKGFSRSSHLIQHQRTHTGERPYDC 196
Query 133 PQRLSTLGYVPCSIQ------------------PFLRLSHL 155
+ + G IQ F RLSHL
Sbjct 197 NECGKSFGRSSHLIQHQTIHTGEKPHKCNECGKSFCRLSHL 237
> SPCC4G3.07c
Length=461
Score = 30.0 bits (66), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 6/79 (7%)
Query 62 PLSSEVT-CTGCSTKGLCVFALCLHAVVPLNQKRAHALDAPWICQEIQDGRSRQKWTVKG 120
PLS+ + C GC++ LC H P++ +DA W C + Q R++Q
Sbjct 202 PLSNRIVFCDGCNSP---YHQLCHHP--PIDDATVQDVDAEWFCMKCQYRRAKQPLETGM 256
Query 121 RMTLEGARQRDCPQRLSTL 139
G + D LS+L
Sbjct 257 TAQDLGLSESDKKMYLSSL 275
> CE03260
Length=1318
Score = 30.0 bits (66), Expect = 2.6, Method: Composition-based stats.
Identities = 12/30 (40%), Positives = 20/30 (66%), Gaps = 0/30 (0%)
Query 37 RENGSHLVPLLGVPMESCRPYSATVPLSSE 66
R+NG + P+ G+PME+ + TV +S+E
Sbjct 4 RKNGDAIEPIDGIPMENGKKKDTTVNVSTE 33
> 7293243
Length=1211
Score = 29.3 bits (64), Expect = 3.5, Method: Composition-based stats.
Identities = 13/46 (28%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query 108 QDGRSRQKWTVKGRMTLEGARQRDCPQRLSTLGYVPCSIQPFLRLS 153
+D + +KW+ K M E + +C +++++LG VP + R+S
Sbjct 928 KDSKQLEKWSTKENMLNE--KIDECTEKIASLGAVPLVDPSYTRMS 971
> Hs11545801
Length=608
Score = 29.3 bits (64), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 7/40 (17%)
Query 81 ALCLHAVVPLNQKRAHALDAPWICQEIQDGRSRQKWTVKG 120
LCL AV PL QK + A+ IC DG S Q+W ++G
Sbjct 576 GLCLRAVDPLGQKGSVAMA---IC----DGSSSQQWHLEG 608
> Hs7706278
Length=383
Score = 28.5 bits (62), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 11/54 (20%), Positives = 26/54 (48%), Gaps = 0/54 (0%)
Query 104 CQEIQDGRSRQKWTVKGRMTLEGARQRDCPQRLSTLGYVPCSIQPFLRLSHLSS 157
C+++++ R+ W K T+E R+ Q++ C + FL ++ ++
Sbjct 159 CEDVREAYRRRGWAFKNPDTIEQCRREGFSQKMQEQKNEGCQVYGFLEVNKVAG 212
> Hs18584681
Length=427
Score = 28.5 bits (62), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 14/54 (25%), Positives = 24/54 (44%), Gaps = 0/54 (0%)
Query 90 LNQKRAHALDAPWICQEIQDGRSRQKWTVKGRMTLEGARQRDCPQRLSTLGYVP 143
+ +R H + P+ C+ + S +K + T G R +CP+ T G P
Sbjct 139 VTHRRTHTGEKPYQCKGCEKKFSDSSTLIKHQRTHTGERPYECPECGKTFGRKP 192
> Hs18563073
Length=388
Score = 28.5 bits (62), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 44/124 (35%), Gaps = 24/124 (19%)
Query 37 RENGSHLVPLLGVPMESC-----RPYSATVPL-------SSEVTCTGCSTKGLCVFALCL 84
RE+GS +P +P+ C RP S +P+ SE+ C C + AL
Sbjct 210 REDGSDTIPECPIPLSGCWEQQARPGSPALPVRALVAGRQSEIDCVACKASNIYRLALDS 269
Query 85 HAVVPLNQKRAHALDAPWICQEIQDGRSRQKWTVKGRMTLEGARQRDCPQRLSTLGYVPC 144
+V A D + E Q G W V G + C QR L P
Sbjct 270 KSVPTF------APDRKVLWAEAQ-GEKTHPWYVHGAACF-----KQCSQRKEGLDSPPE 317
Query 145 SIQP 148
+ P
Sbjct 318 ATLP 321
> Hs4502839
Length=3801
Score = 28.1 bits (61), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 26/71 (36%), Gaps = 2/71 (2%)
Query 54 CRPYSATVPLSSEVTCTGCSTKGLCVFALCLHAVVPLNQKRAHAL--DAPWICQEIQDGR 111
C+PYS + +S + TC LC P+ A D +C G
Sbjct 3625 CKPYSILISVSRDGTCIIWDLNRLCYVQSLAGHKSPVTAVSASETSGDIATVCDSAGGGS 3684
Query 112 SRQKWTVKGRM 122
+ WTV G +
Sbjct 3685 DLRLWTVNGDL 3695
> Hs22054962
Length=204
Score = 28.1 bits (61), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 35/88 (39%), Gaps = 16/88 (18%)
Query 64 SSEVTCTGCSTKGLCVFALCLHAVVPLNQKRAHALDAPWICQEIQD---------GRSRQ 114
S EVTC+ C T AL H KR H + P+ C+E G ++
Sbjct 118 SEEVTCSECGTSFRQGSALIGH-------KRVHTGEKPYECEECGKAFRVSSNLTGHKKR 170
Query 115 KWTVKGRMTLEGARQRDCPQRLSTLGYV 142
K V L+G+R+ P +S V
Sbjct 171 KHQVWSTHELDGSRKSLSPVTVSQTSVV 198
> CE08047
Length=336
Score = 28.1 bits (61), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 9/24 (37%), Positives = 15/24 (62%), Gaps = 0/24 (0%)
Query 56 PYSATVPLSSEVTCTGCSTKGLCV 79
PY+ + + +E+TC CS LC+
Sbjct 81 PYTFEIAVGNEITCLYCSAFALCI 104
Lambda K H
0.321 0.136 0.431
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 2490594054
Database: kyva
Posted date: Jul 3, 2009 9:03 AM
Number of letters in database: 47,500,486
Number of sequences in database: 112,920
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40