bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.24+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: kyva
           112,920 sequences; 47,500,486 total letters



Query=  Eten_2023_orf5
Length=157
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  At4g01990                                                           31.2    0.84
  At2g43600                                                           28.9    3.9
  CE27062                                                             28.5    5.3
  CE27063                                                             28.5    5.4
  7301583                                                             28.5    6.1


> At4g01990
Length=501

 Score = 31.2 bits (69),  Expect = 0.84, Method: Composition-based stats.
 Identities = 15/30 (50%), Positives = 17/30 (56%), Gaps = 0/30 (0%)

Query  89   SRMARRPCCCCAAAAAAAAAAAAADVPATA  118
            SR+ARR C   A A A  +  AAA VP  A
Sbjct  5    SRLARRFCATLATATAEISGEAAASVPTKA  34


> At2g43600
Length=273

 Score = 28.9 bits (63),  Expect = 3.9, Method: Compositional matrix adjust.
 Identities = 12/46 (26%), Positives = 22/46 (47%), Gaps = 8/46 (17%)

Query  53  MEVKSCLYSPAVLGTFPASTSAKICCT--------CCQPWGFCGSR  90
           M +K+ ++S  +L     +  ++ C          CC  WGFCG++
Sbjct  1   MTIKNVIFSLFILAILAETVFSQNCMDTSCPGLKECCSRWGFCGTK  46


> CE27062
Length=1147

 Score = 28.5 bits (62),  Expect = 5.3, Method: Composition-based stats.
 Identities = 22/93 (23%), Positives = 39/93 (41%), Gaps = 4/93 (4%)

Query  63   AVLGTFPASTSAKICCTCCQPWGFCGSRMARRPCCCCAAAAAAAAAAAAADVPATAPSSS  122
            + +G  P   + K C +C Q      S   RR C  C A + A A   +    +    S 
Sbjct  121  STIGVLPFVCAHKTCQSCYQ---MTPSSYDRRACKLCGAVSTATANFTSQMYLSPTLPSP  177

Query  123  PGGAAAAKPGGETKSSSSSAAATVYGSPASFAF  155
            P GA  +     T ++  +++  ++  P +F+F
Sbjct  178  PRGALMSDCSTPTMNNHINSSTPLH-QPRAFSF  209


> CE27063
Length=1143

 Score = 28.5 bits (62),  Expect = 5.4, Method: Composition-based stats.
 Identities = 22/93 (23%), Positives = 39/93 (41%), Gaps = 4/93 (4%)

Query  63   AVLGTFPASTSAKICCTCCQPWGFCGSRMARRPCCCCAAAAAAAAAAAAADVPATAPSSS  122
            + +G  P   + K C +C Q      S   RR C  C A + A A   +    +    S 
Sbjct  121  STIGVLPFVCAHKTCQSCYQ---MTPSSYDRRACKLCGAVSTATANFTSQMYLSPTLPSP  177

Query  123  PGGAAAAKPGGETKSSSSSAAATVYGSPASFAF  155
            P GA  +     T ++  +++  ++  P +F+F
Sbjct  178  PRGALMSDCSTPTMNNHINSSTPLH-QPRAFSF  209


>
Length=1162

 Score = 28.5 bits (62),  Expect = 6.1, Method: Composition-based stats.
 Identities = 13/29 (44%), Positives = 19/29 (65%), Gaps = 0/29 (0%)

Query  110  AAADVPATAPSSSPGGAAAAKPGGETKSS  138
            +A D P   P+S+P  +A+ +P GE KSS
Sbjct  908  SADDDPVLNPNSNPPASASDEPAGERKSS  936



Lambda     K      H
   0.321    0.128    0.424 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 2106641548


  Database: kyva
    Posted date:  Jul 3, 2009  9:03 AM
  Number of letters in database: 47,500,486
  Number of sequences in database:  112,920



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40