bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: kyva 112,920 sequences; 47,500,486 total letters Query= Eten_2016_orf2 Length=98 Score E Sequences producing significant alignments: (Bits) Value Hs18545672 31.2 0.51 Hs4504143 30.4 0.93 Hs14762656 30.0 1.0 Hs20536571 27.3 7.7 > Hs18545672 Length=184 Score = 31.2 bits (69), Expect = 0.51, Method: Compositional matrix adjust. Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 0/45 (0%) Query 34 AAAATATTVQPQSSSSSSSSAAAAAGAARPVCFLTLRPPVSFTVP 78 A AAT V PQ+ SS+ SA ++ A C + + PP+S+T+P Sbjct 66 AVAATTARVHPQARPSSARSAKTSSPATFARCSIRMTPPISWTLP 110 > Hs4504143 Length=1180 Score = 30.4 bits (67), Expect = 0.93, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 3/63 (4%) Query 12 EAPTLHK---ARAAGPEGSMQRSLSAAAATATTVQPQSSSSSSSSAAAAAGAARPVCFLT 68 + P+LH AR++ +GS+ +S+ T + +S S+AA + G P+C Sbjct 1006 DVPSLHSEPVARSSSSQGSLMEQISSVVTRFTANISELNSMMLSTAAPSPGVGAPLCSSY 1065 Query 69 LRP 71 L P Sbjct 1066 LIP 1068 > Hs14762656 Length=1212 Score = 30.0 bits (66), Expect = 1.0, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 3/63 (4%) Query 12 EAPTLHK---ARAAGPEGSMQRSLSAAAATATTVQPQSSSSSSSSAAAAAGAARPVCFLT 68 + P+LH AR++ +GS+ +S+ T + +S S+AA + G P+C Sbjct 1038 DVPSLHSEPVARSSSSQGSLMEQISSVVTRFTANISELNSMMLSTAAPSPGVGAPLCSSY 1097 Query 69 LRP 71 L P Sbjct 1098 LIP 1100 > Hs20536571 Length=5635 Score = 27.3 bits (59), Expect = 7.7, Method: Composition-based stats. Identities = 23/72 (31%), Positives = 31/72 (43%), Gaps = 0/72 (0%) Query 1 TLNPEGLALHLEAPTLHKARAAGPEGSMQRSLSAAAATATTVQPQSSSSSSSSAAAAAGA 60 TL+ E L T HK A E QR LS+ + VQP + + AA AG+ Sbjct 4097 TLSCEADGLPPPDITWHKDGRAIVESIRQRVLSSGSLQIAFVQPGDAGHYTCMAANVAGS 4156 Query 61 ARPVCFLTLRPP 72 + LT+ P Sbjct 4157 SSTSTKLTVHVP 4168 Lambda K H 0.312 0.121 0.340 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1194657780 Database: kyva Posted date: Jul 3, 2009 9:03 AM Number of letters in database: 47,500,486 Number of sequences in database: 112,920 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40